RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 DDIT4LQ96D03 193 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 DTNBP1Q96EV8 351 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 MRGPRX4Q96LA9 322 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 ERMAPQ96PL5 475 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-206ENST00000487062 BCL7BQ9BQE9 202 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 RHNO1Q9BSD3 238 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 CDCA4Q9BXL8 241 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 YIPF3Q9GZM5 350 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 LHPPQ9H008 270 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 MCCC2Q9HCC0 563 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 GALNT9Q9HCQ5 603 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 FGF20Q9NP95 211 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-206ENST00000487062 SERINC1Q9NRX5 453 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 MRPS18AQ9NVS2 196 aaKnown RBP6.4□□□□□ -1.38
SF3A3-206ENST00000487062 MED11Q9P086 117 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 TEKT2Q9UIF3 430 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 DIMT1Q9UNQ2 313 aaKnown RBP6.4□□□□□ -1.38
SF3A3-206ENST00000487062 ERGIC3Q9Y282 383 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 HIF3AQ9Y2N7 669 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 GPR52Q9Y2T5 361 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 SPIN1Q9Y657 262 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-206ENST00000487062 WDR87Q6ZQQ6 2873 aa6.4□□□□□ -1.38
SF3A3-206ENST00000487062 PTPRBP23467 1997 aa6.4□□□□□ -1.39
SF3A3-206ENST00000487062 EML6Q6ZMW3 1958 aa6.4□□□□□ -1.39
SF3A3-206ENST00000487062 A0A087WZY1 265 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 TMEM72A0PK05 275 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PROB1E7EW31 1015 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 BLOC1S5-TXNDC5H3BN57 136 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ADAM10O14672 748 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 TERTO14746 1132 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 MYL12BO14950 172 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ARPC3O15145 178 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF208O43345 1280 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 INMTO95050 263 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 OR6A2O95222 327 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 BGLAPP02818 100 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 P04436 131 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ASAH2BP0C7U1 165 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 APEHP13798 732 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PRKCAP17252 672 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FKBP2P26885 142 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ACVR2AP27037 513 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ADH6P28332 368 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 GTF2E2P29084 291 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 C21orf33P30042 268 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 HTR1FP30939 366 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ATP6V1E1P36543 226 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PTGDSP41222 190 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 EIF1P41567 113 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 RPS5P46782 204 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 RPS4XP62701 263 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 EGR4Q05215 589 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 C1DQ13901 141 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 IRF3Q14653 427 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.39□□□□□ -1.392e-9■□□□□ 10
SF3A3-206ENST00000487062 ALG10Q5BKT4 473 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 SLC25A53Q5H9E4 307 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 SLC35F1Q5T1Q4 408 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FAM69AQ5T7M9 428 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 AADACL4Q5VUY2 407 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 C1orf140Q5VVS0 124 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 BICRALQ6AI39 1079 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FCRLBQ6BAA4 426 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 OR5M10Q6IEU7 315 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 BCDIN3DQ7Z5W3 292 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ADGRG3Q86Y34 549 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PLCZ1Q86YW0 608 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 CPOQ8IVL8 374 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 LRRC17Q8N6Y2 441 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FAM98AQ8NCA5 519 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 OR2M3Q8NG83 312 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 OR52I1Q8NGK6 324 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PAQR8Q8TEZ7 354 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 NKD1Q969G9 470 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 TAAR8Q969N4 342 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 RNF166Q96A37 237 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 OTULINQ96BN8 352 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ISOC1Q96CN7 298 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 NMD3Q96D46 503 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 RNFT2Q96EX2 444 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 THOC3Q96J01 351 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 EAF1Q96JC9 268 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 SGCZQ96LD1 299 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FER1L6-AS2Q96M78 137 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 GPX7Q96SL4 187 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 TSC22D3Q99576 134 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 MND1Q9BWT6 205 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 TAPBPLQ9BX59 468 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ANGPTL4Q9BY76 406 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 GPN2Q9H9Y4 310 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 HINT3Q9NQE9 182 aaKnown RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 PTTG2Q9NZH5 202 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 ABI3Q9P2A4 366 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 CHRNA9Q9UGM1 479 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 EXOSC1Q9Y3B2 195 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms