RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MYO9BQ13459 2157 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 LOC285095A0A1B0GVY8 99 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 RNF222A6NCQ9 220 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PRR23D1E9PI22 279 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 G3V2L1 256 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 K7EQD1 137 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SGK494L7N484 410 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FBP2O00757 339 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SDHDO14521 159 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF749O43361 778 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SNAP91O60641 907 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ECI2O75521 394 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NEBLO76041 1014 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NDUFA7O95182 113 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 AP2A1O95782 977 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 TTC4O95801 387 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 HLA-DQB2P05538 268 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 KRT8P05787 483 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CISD3P0C7P0 127 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 GSTT2P0CG29 244 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 GSTT2BP0CG30 244 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PRR23D2P0DMB1 279 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PSMC3P17980 439 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ATP6V1C1P21283 382 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 DRD5P21918 477 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ANOS1P23352 680 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CD70P32970 193 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CSKP41240 450 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 GRIA1P42261 906 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 MAGEA3P43357 314 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 HTR5AP47898 357 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CSNK1DP48730 415 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 MAXP61244 160 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ERVK-16P61578 105 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FCHO2Q0JRZ9 810 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PDIA2Q13087 525 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 RUNX3Q13761 415 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ENPP2Q13822 863 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 EXOSC2Q13868 293 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 KIAA0141Q14154 515 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 DMC1Q14565 340 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 IHHQ14623 411 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PDGFRLQ15198 375 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 UAP1Q16222 522 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 HAGHQ16775 308 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SLC36A3Q495N2 470 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ACSF3Q4G176 576 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ASPHD2Q6ICH7 369 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NIPAL3Q6P499 406 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 VITQ6UXI7 678 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FRRS1Q6ZNA5 592 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CYS1Q717R9 158 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 KCNMB4Q86W47 210 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ZBED8Q8IZ13 594 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 KRT222Q8N1A0 295 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 BBS5Q8N3I7 341 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 DCAF4L2Q8NA75 395 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NUP37Q8NFH4 326 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 OR10G7Q8NGN6 311 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 OR1K1Q8NGR3 316 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 OR2T6Q8NHC8 308 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FAM76AQ8TAV0 307 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 WFDC5Q8TCV5 224 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PYROXD1Q8WU10 500 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FGF14Q92915 247 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ELSPBP1Q96BH3 223 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 TADA1Q96BN2 335 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 LRRC39Q96DD0 335 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 FBXO17Q96EF6 278 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ATXN7L3BQ96GX2 97 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 C4orf36Q96KX1 117 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 C9orf72Q96LT7 481 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SERPINB12Q96P63 405 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 VPS35Q96QK1 796 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 XPO6Q96QU8 1125 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 EBNA1BP2Q99848 306 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NAT9Q9BTE0 207 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 APOOQ9BUR5 198 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 RBM24Q9BX46 236 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 BBS2Q9BXC9 721 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 MRPL13Q9BYD1 178 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 POLR1EQ9GZS1 481 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CDC42EP4Q9H3Q1 356 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 ALG9Q9H6U8 611 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 YY1AP1Q9H869 796 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 RMND5AQ9H871 391 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 LRRC40Q9H9A6 602 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 COG4Q9H9E3 785 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 WDR41Q9HAD4 459 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NT5MQ9NPB1 228 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 TAS2R16Q9NYV7 291 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 BFARQ9NZS9 450 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 CACNG5Q9UF02 275 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 SHROOM3Q8TF72 1996 aa3.37□□□□□ -1.87
PTCD3-216ENST00000487043 PRRC2BQ5JSZ5 2229 aaKnown RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 MYO18AQ92614 2054 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 MYOFQ9NZM1 2061 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms