RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TATDN3Q17R31 274 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 SLC25A35Q3KQZ1 300 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 ELOA3BQ3SY89 546 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 GXYLT1Q4G148 440 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF57Q68EA5 555 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 SLITRK4Q8IW52 837 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 GATSQ8NAP1 163 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 ELOA3Q8NG57 546 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 PTPMT1Q8WUK0 201 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 SNX33Q8WV41 574 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 LANCL2Q9NS86 450 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 GMEB2Q9UKD1 530 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 CLCA3PQ9Y6N3 262 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 NCOR1O75376 2440 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
PDLIM7-207ENST00000486828 OR6C68A6NDL8 312 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 IL33O95760 270 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 UBL4AP11441 157 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 PITPNBP48739 271 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 SLC37A1P57057 533 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ERVK-25P63136 954 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 SKP2Q13309 424 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 IL10RAQ13651 578 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RPL22L1Q6P5R6 122 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ATG4DQ86TL0 474 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ZPLD1Q8TCW7 415 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 UPRTQ96BW1 309 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RASD2Q96D21 266 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 MRPL48Q96GC5 212 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 WACQ9BTA9 647 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 HDHD2Q9H0R4 259 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 EXOSC3Q9NQT5 275 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 MAU2Q9Y6X3 613 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 PRKNO60260 465 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ARL6IP5O75915 188 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 HPGDP15428 266 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ALAS2P22557 587 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RCVRNP35243 200 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 GRK6P43250 576 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 PPICP45877 212 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF687Q8N1G0 1237 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 MOSPD2Q8NHP6 518 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 PHOSPHO1Q8TCT1 267 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 LIPHQ8WWY8 451 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 TRIM63Q969Q1 353 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RFT1Q96AA3 541 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 HSPA12BQ96MM6 686 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 MARVELD1Q9BSK0 173 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RAB33BQ9H082 229 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 RANGRFQ9HD47 186 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 NCDNQ9UBB6 729 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 GNG8Q9UK08 70 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 COPS3Q9UNS2 423 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 MMACHCQ9Y4U1 282 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 ALG5Q9Y673 324 aa16.43■□□□□ 0.22
PDLIM7-207ENST00000486828 SPTBP11277 2137 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 FAM172BPA6NC97 362 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 AGRPO00253 132 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 SCDO00767 359 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 IMPA2O14732 288 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 OIP5O43482 229 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 SELENOFO60613 162 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 TRIM3O75382 744 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 SLC43A1O75387 559 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 GATBO75879 557 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 PAHP00439 452 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 HSF2Q03933 536 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 DEFB133Q30KQ1 61 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 CCDC58Q4VC31 144 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 UTS2BQ765I0 119 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 GHDCQ8N2G8 530 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF321PQ8N8H1 164 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 ZDHHC12Q96GR4 267 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 SLC46A1Q96NT5 459 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 THAP7Q9BT49 309 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 MFRPQ9BY79 579 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 ZCCHC4Q9H5U6 513 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 PNO1Q9NRX1 252 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 CUTCQ9NTM9 273 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 HIF3AQ9Y2N7 669 aa16.42■□□□□ 0.22
PDLIM7-207ENST00000486828 HEATR5AQ86XA9 2040 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TRBV2A0A0J9YWF9 115 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 NOTOA8MTQ0 251 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 FZD7O75084 574 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 GLCEO94923 617 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 UCHL1P09936 223 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 EDNRAP25101 427 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 MAOBP27338 520 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 RPS11P62280 158 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 RACK1P63244 317 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 MRPS15P82914 257 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF74Q16587 644 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 NDUFA5Q16718 116 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 PYHIN1Q6K0P9 492 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 OGFOD3Q6PK18 319 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 GPR135Q8IZ08 494 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 OR6K6Q8NGW6 343 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms