RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CBR4Q8N4T8 237 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 OR10D3Q8NH80 312 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 DNAJC9Q8WXX5 260 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 EME1Q96AY2 570 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 SARAFQ96BY9 339 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 SDCCAG3Q96C92 435 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 DNAJA3Q96EY1 480 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-227ENST00000486806 RBM4BQ9BQ04 359 aaKnown RBP8.59□□□□□ -1.03
MCF2L-227ENST00000486806 C9orf16Q9BUW7 83 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
MCF2L-227ENST00000486806 SRXN1Q9BYN0 137 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 EXO5Q9H790 373 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 ALKBH4Q9NXW9 302 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 STOML1Q9UBI4 398 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-227ENST00000486806 TRAPPC4Q9Y296 219 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 CORINQ9Y5Q5 1042 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 NBEAQ8NFP9 2946 aa8.59□□□□□ -1.03
MCF2L-227ENST00000486806 PIEZO2Q9H5I5 2752 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 EFCAB9A8MZ26 197 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 M0R082 166 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 TP53P04637 393 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 EDN3P14138 238 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF26P17031 533 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 FUT1P19526 365 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 GRPRP30550 384 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 UQCRC1P31930 480 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SLC9A3P48764 834 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ALDH3A2P51648 485 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 FXYD6P3P58550 94 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 RAC3P60763 192 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 CSNK2A1P68400 391 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 H3F3AP84243 136 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 OR7A5Q15622 319 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 OTUD3Q5T2D3 398 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 HBMQ6B0K9 141 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ABLIM2Q6H8Q1 611 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 PPP4R4Q6NUP7 873 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 KLHL17Q6TDP4 642 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF620Q6ZNG0 422 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 MAMDC2Q7Z304 686 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 PM20D2Q8IYS1 436 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 PARP8Q8N3A8 854 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 LRRC17Q8N6Y2 441 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 PACRGLQ8N7B6 248 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 CLDN22Q8N7P3 220 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SCAIQ8N9R8 606 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ATG16L2Q8NAA4 619 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ADPRHL1Q8NDY3 354 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 OR13C2Q8NGS9 318 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF417Q8TAU3 575 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 CPT1CQ8TCG5 803 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 GNPDA2Q8TDQ7 276 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 GTPBP3Q969Y2 492 aaKnown RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 RELTQ969Z4 430 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 CPNE4Q96A23 557 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF587Q96SQ5 575 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SLC29A1Q99808 456 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SMURF2Q9HAU4 748 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 FANCFQ9NPI8 374 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 C8orf4Q9NR00 106 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 NANSQ9NR45 359 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 PAQR5Q9NXK6 330 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 MRPL39Q9NYK5 338 aaKnown RBP8.58□□□□□ -1.04
MCF2L-227ENST00000486806 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SEC14L4Q9UDX3 406 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 SIGLEC7Q9Y286 467 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 HIF3AQ9Y2N7 669 aa8.58□□□□□ -1.04
MCF2L-227ENST00000486806 TRAV27A0A087WT01 109 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 A0A1W2PNV4 684 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 AQP7P3A6NL99 342 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF814B7Z6K7 855 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 NPIPA2E9PIF3 369 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 NPIPA3F8WFD2 350 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SULT2B1O00204 365 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 DLGAP1O14490 977 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 BCKDKO14874 412 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SMAD9O15198 467 aaKnown RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 ZNHIT1O43257 154 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 CXCL13O43927 109 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 PTP4A3O75365 173 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 POU2F1P14859 743 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 KLK2P20151 261 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 GSTM3P21266 225 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 IGFBP5P24593 272 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 PTGS2P35354 604 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 EIF1AXP47813 144 aaKnown RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 PTDSS1P48651 473 aaKnown RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 AGFG1P52594 562 aaKnown RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 MLLT10P55197 1068 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 RPS3AP61247 264 aaKnown RBP8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SLC35A1P78382 337 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SRYQ05066 204 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 COX10Q12887 443 aa8.57□□□□□ -1.04
MCF2L-227ENST00000486806 SGCBQ16585 318 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms