RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 NPTNQ9Y639 398 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 IGHV3OR16-13A0A075B7E8 117 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 IGHV1OR21-1A0A087WYE8 117 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 OR52A4PA6NMU1 304 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 MMP23AO75900 390 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 LGI1O95970 557 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 HLCSP50747 726 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 GPM6AP51674 278 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 LYZP61626 148 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 LRRC74AQ0VAA2 488 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 GRB7Q14451 532 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 RABL6Q3YEC7 729 aaPredicted RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 RNF212Q495C1 297 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 BOLA3Q53S33 107 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 TIGD3Q6B0B8 471 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 OR2A2Q6IF42 318 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 DHDDSQ86SQ9 333 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 OR52H1Q8NGJ2 320 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 OR1L4Q8NGR5 311 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 ZNF564Q8TBZ8 553 aaPredicted RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 SETD7Q8WTS6 366 aaKnown RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 PHYHIPLQ96FC7 376 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 ZNF641Q96N77 438 aaPredicted RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 RIOK1Q9BRS2 568 aaKnown RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 PKIBQ9C010 78 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 NAP1L2Q9ULW6 460 aaPredicted RBP3.26□□□□□ -1.89
SMC4-218ENST00000486711 ASF1AQ9Y294 204 aa3.26□□□□□ -1.89
SMC4-218ENST00000486711 A0A0G2JRQ6 117 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ARHGEF35A5YM69 484 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 BTBD17A6NE02 478 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 LOC110117498-PIK3R3F6TDL0 507 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 UBXN8O00124 270 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 MBTPS2O43462 519 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 HCRTR1O43613 425 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 SERPINA3P01011 423 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TIMP1P01033 207 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 P04436 131 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 DUX4L4P0CJ87 422 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 GYG1P46976 350 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ACTR3P61158 418 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 RPS14P62263 151 aaKnown RBP3.25□□□□□ -1.89
SMC4-218ENST00000486711 CDK16Q00536 496 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TLE4Q04727 773 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 PLD1Q13393 1074 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 VGLL4Q14135 290 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 SSX2Q16385 188 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 CTSL3PQ5NE16 218 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 MARCH8Q5T0T0 291 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 GPRC6AQ5T6X5 926 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ENPP6Q6UWR7 440 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 Q6ZN92 141 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TAS2R42Q7RTR8 314 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TRIM69Q86WT6 500 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ECHDC2Q86YB7 292 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 NUDCD3Q8IVD9 361 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ZNF740Q8NDX6 193 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 OR51S1Q8NGJ8 323 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 LINC01006Q8NI28 216 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 BRSK1Q8TDC3 778 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 CHCHD10Q8WYQ3 142 aaPredicted RBP3.25□□□□□ -1.89
SMC4-218ENST00000486711 NT5C3BQ969T7 300 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TPD52L3Q96J77 140 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 MTMR9Q96QG7 549 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 NAT9Q9BTE0 207 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 TRIM62Q9BVG3 475 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 ROPN1BQ9BZX4 212 aaPredicted RBP3.25□□□□□ -1.89
SMC4-218ENST00000486711 KIF25-AS1Q9Y6Z4 181 aa3.25□□□□□ -1.89
SMC4-218ENST00000486711 A0A0J9YXY3 114 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 A0A0U1RQS6 177 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 CCDC182A6NF36 153 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 A6NIZ1 184 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 TRIM64CA6NLI5 447 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 ABCD4O14678 606 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 TOM1O60784 492 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 ZNF780AO75290 641 aaPredicted RBP3.24□□□□□ -1.89
SMC4-218ENST00000486711 ACTL6AO96019 429 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 SLC2A3P11169 496 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 CD1EP15812 388 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 RPS2P15880 293 aaKnown RBP3.24□□□□□ -1.89
SMC4-218ENST00000486711 COX7A1P24310 79 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 PBLDP30039 288 aaPredicted RBP3.24□□□□□ -1.89
SMC4-218ENST00000486711 DDOSTP39656 456 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 KIR2DS4P43632 304 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 KLK7P49862 253 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 KPNA2P52292 529 aaKnown RBP3.24□□□□□ -1.89
SMC4-218ENST00000486711 RAP1BP61224 184 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 OR5I1Q13606 314 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 KCTD21Q4G0X4 260 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 CARD16Q5EG05 197 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 C6orf226Q5I0X4 101 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 ZNF544Q6NX49 715 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 H2BFWTQ7Z2G1 175 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 SLC26A11Q86WA9 606 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 ERI1Q8IV48 349 aaKnown RBP3.24□□□□□ -1.89
SMC4-218ENST00000486711 RDH10Q8IZV5 341 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 ACOT4Q8N9L9 421 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 FNDC5Q8NAU1 212 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 UCN3Q969E3 161 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 NUS1Q96E22 293 aa3.24□□□□□ -1.89
SMC4-218ENST00000486711 MRPL45Q9BRJ2 306 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms