RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 RAI1Q7Z5J4 1906 aaPredicted RBP16.17■□□□□ 0.18
CLDN11-206ENST00000486429 RAD51DO75771 328 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 NTF4P34130 210 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 PCBP3P57721 371 aaKnown RBP16.16■□□□□ 0.18
CLDN11-206ENST00000486429 FAPQ12884 760 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 PPA1Q15181 289 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 MAPRE2Q15555 327 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 ALG10BQ5I7T1 473 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 TIMM23BQ5SRD1 257 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 C5orf46Q6UWT4 87 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 SSX8Q7RTT4 187 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 NET1Q7Z628 596 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-206ENST00000486429 GPAT4Q86UL3 456 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 SLC30A8Q8IWU4 369 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 ZNF433Q8N7K0 673 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-206ENST00000486429 DNAJA4Q8WW22 397 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-206ENST00000486429 TMEM45BQ96B21 275 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 MUCL1Q96DR8 90 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 PIP5K1AQ99755 562 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 KAT8Q9H7Z6 458 aaKnown RBP16.16■□□□□ 0.18
CLDN11-206ENST00000486429 EVA1AQ9H8M9 152 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 TAS2R16Q9NYV7 291 aa16.16■□□□□ 0.18
CLDN11-206ENST00000486429 CIB4A0PJX0 185 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 OR5H1A6NKK0 313 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 BBIP1A8MTZ0 92 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 FBP2O00757 339 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 CLOCKO15516 846 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 SMPD2O60906 423 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 MFN2O95140 757 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 VAMP5O95183 116 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 PLAUP00749 431 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 CD3EP07766 207 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 PNMTP11086 282 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 PCGF2P35227 344 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 DMTNQ08495 405 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 KLF10Q13118 480 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 MMEL1Q495T6 779 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 COQ5Q5HYK3 327 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 TMEM225Q6GV28 225 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 SEZ6L2Q6UXD5 910 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 RANBP3LQ86VV4 465 aaPredicted RBP16.15■□□□□ 0.18
CLDN11-206ENST00000486429 P2RY8Q86VZ1 359 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 SMYD1Q8NB12 490 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 MFSD8Q8NHS3 518 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 PTDSS2Q9BVG9 487 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 PIF1Q9H611 641 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 SAR1AQ9NR31 198 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 SELENONQ9NZV5 590 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 UPB1Q9UBR1 384 aa16.15■□□□□ 0.18
CLDN11-206ENST00000486429 MED13LQ71F56 2210 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 FLNAP21333 2647 aaKnown RBP16.14■□□□□ 0.17
CLDN11-206ENST00000486429 CCT8L1PA6NM43 557 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 MRASO14807 208 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 OPN1SWP03999 348 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 CD99P14209 185 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 RPS5P46782 204 aaKnown RBP16.14■□□□□ 0.17
CLDN11-206ENST00000486429 P2RY4P51582 365 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 ADAM8P78325 824 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 EGR4Q05215 589 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 CYLC2Q14093 348 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-206ENST00000486429 NCMAPQ5T1S8 102 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 ULK3Q6PHR2 472 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 AAED1Q7RTV5 226 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 PATL1Q86TB9 770 aaKnown RBP16.14■□□□□ 0.17
CLDN11-206ENST00000486429 OR10A6Q8NH74 314 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 RNF217Q8TC41 542 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 SLC38A4Q969I6 547 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 SLC25A36Q96CQ1 311 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 KTI12Q96EK9 354 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-206ENST00000486429 TMUB1Q9BVT8 246 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 TMEM27Q9HBJ8 222 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 RASD1Q9Y272 281 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 CAPN7Q9Y6W3 813 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 MTORP42345 2549 aa16.14■□□□□ 0.17
CLDN11-206ENST00000486429 FTCDNL1E5RQL4 147 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 M0R3H8 397 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 FXYD1O00168 92 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 HS3ST1O14792 307 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 OR2T1O43869 369 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 ITGA5P08648 1049 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 NKX6-1P78426 367 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-206ENST00000486429 BSPH1Q075Z2 132 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 FOXD4Q12950 439 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-206ENST00000486429 INTS11Q5TA45 600 aaKnown RBP16.13■□□□□ 0.17
CLDN11-206ENST00000486429 TSPO2Q5TGU0 170 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 REP15Q6BDI9 236 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 SNX32Q86XE0 403 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF611Q8N823 705 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 OR8J3Q8NGG0 315 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 AKAP1Q92667 903 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLDN11-206ENST00000486429 LRRC58Q96CX6 371 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 SLC47A1Q96FL8 570 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF385AQ96PM9 386 aaKnown RBP16.13■□□□□ 0.17
CLDN11-206ENST00000486429 SH3GL1Q99961 368 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 PRR14Q9BWN1 585 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 SLCO5A1Q9H2Y9 848 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 SLC7A10Q9NS82 523 aa16.13■□□□□ 0.17
CLDN11-206ENST00000486429 PRR14LQ5THK1 2151 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms