RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TRAV36DV7A0A075B6V5 113 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 GYG2O15488 501 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 EIF1BO60739 113 aaKnown RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 OR5F1O95221 314 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 LYPD3O95274 346 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 ATP6V1B2P21281 511 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 FXNQ16595 210 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 FAM69AQ5T7M9 428 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 EEF1A1P5Q5VTE0 462 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 TTC33Q6PID6 262 aaPredicted RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 C5orf46Q6UWT4 87 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 CYP2R1Q6VVX0 501 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 WDR88Q6ZMY6 472 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 NUFIP2Q7Z417 695 aaKnown RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 TMEM99Q8N816 258 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 OR6K3Q8NGY3 331 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 MFSD8Q8NHS3 518 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 TAAR8Q969N4 342 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 LRRC46Q96FV0 321 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 PRRC1Q96M27 445 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 EPYCQ99645 322 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 TMEM43Q9BTV4 400 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 THTPAQ9BU02 230 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 RBM24Q9BX46 236 aaKnown RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 AMBRA1Q9C0C7 1298 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 POLR2J2Q9GZM3 115 aaKnown RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 POLR2J3Q9H1A7 115 aaKnown RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 C1orf21Q9H246 121 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 CHST11Q9NPF2 352 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
HPS4-214ENST00000485842 EMC3Q9P0I2 261 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 RHCGQ9UBD6 479 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 RIMS3Q9UJD0 308 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
HPS4-214ENST00000485842 AQP7P3A6NL99 342 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 J3KTA2 159 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 hCG_2039718K7EN88 272 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 MSTNO14793 375 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 OR2T1O43869 369 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 CGAP01215 116 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 YES1P07947 543 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 GRPRP30550 384 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 IFNA8P32881 189 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 CBX1P83916 185 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 BNIP1Q12981 228 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 SNTB1Q13884 538 aaKnown RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 EXOC3L2Q2M3D2 409 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 SP5Q6BEB4 398 aaPredicted RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 PAQR6Q6TCH4 344 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 LINC00114Q6XXX2 140 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 GPAT4Q86UL3 456 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 NKAIN4Q8IVV8 208 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 ZNF610Q8N9Z0 462 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 TMEM255BQ8WV15 326 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 RNASE6Q93091 150 aaKnown RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 SLC7A6OSQ96CW6 309 aaPredicted RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 MPP4Q96JB8 637 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 PRSS27Q9BQR3 290 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 TACO1Q9BSH4 297 aaKnown RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 MUC13Q9H3R2 512 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 BCO1Q9HAY6 547 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 GALNT8Q9NY28 637 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 JKAMPQ9P055 326 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 ACTR3BQ9P1U1 418 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 SEC14L4Q9UDX3 406 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 ING1Q9UK53 422 aaPredicted RBP10.54□□□□□ -0.72
HPS4-214ENST00000485842 A4GNTQ9UNA3 340 aa10.54□□□□□ -0.72
HPS4-214ENST00000485842 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 FTCDNL1E5RQL4 147 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 LRRN3E7EW58 273 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 M0R082 166 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 PIP5K1CO60331 668 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 STAMBPO95630 424 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 BGLAPP02818 100 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 CD8BP10966 210 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 COX6B1P14854 86 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 UGT2B15P54855 530 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 H3F3AP84243 136 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 IL1RL1Q01638 556 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 ST3GAL3Q11203 375 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 TMEM225Q6GV28 225 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 GALNT5Q7Z7M9 940 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 STK32CQ86UX6 486 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 CYP4Z1Q86W10 505 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 OFCC1Q8IZS5 231 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 PFN4Q8NHR9 129 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 ZNF417Q8TAU3 575 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 PYURFQ96I23 114 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 MOGAT1Q96PD6 335 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
HPS4-214ENST00000485842 BTBD10Q9BSF8 475 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 FNDC11Q9BVV2 318 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms