RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TMEM99Q8N816 258 aa15.04■□□□□ -0
SMC4-216ENST00000485645 MAELQ96JY0 434 aaKnown RBP15.04■□□□□ -0
SMC4-216ENST00000485645 TAPBPLQ9BX59 468 aa15.04■□□□□ -0
SMC4-216ENST00000485645 RMND5AQ9H871 391 aa15.04■□□□□ -0
SMC4-216ENST00000485645 FKRPQ9H9S5 495 aa15.04■□□□□ -0
SMC4-216ENST00000485645 TPT1P8Q9HAU6 139 aa15.04■□□□□ -0
SMC4-216ENST00000485645 ZIM2Q9NZV7 527 aa15.04■□□□□ -0
SMC4-216ENST00000485645 DSPPQ9NZW4 1301 aa15.03■□□□□ -0
SMC4-216ENST00000485645 TMEM247A6NEH6 219 aa15.03■□□□□ -0
SMC4-216ENST00000485645 AQP7P3A6NL99 342 aa15.03■□□□□ -0
SMC4-216ENST00000485645 ACAA2P42765 397 aaKnown RBP15.03■□□□□ -0
SMC4-216ENST00000485645 DSTNP60981 165 aa15.03■□□□□ -0
SMC4-216ENST00000485645 LARS2Q15031 903 aaKnown RBP15.03■□□□□ -0
SMC4-216ENST00000485645 ZSWIM7Q19AV6 140 aa15.03■□□□□ -0
SMC4-216ENST00000485645 SLC9B1Q4ZJI4 515 aa15.03■□□□□ -0
SMC4-216ENST00000485645 C1QTNF12Q5T7M4 302 aa15.03■□□□□ -0
SMC4-216ENST00000485645 AGBL2Q5U5Z8 902 aa15.03■□□□□ -0
SMC4-216ENST00000485645 RNF220Q5VTB9 566 aa15.03■□□□□ -0
SMC4-216ENST00000485645 ZNF544Q6NX49 715 aa15.03■□□□□ -0
SMC4-216ENST00000485645 CLEC2AQ6UVW9 174 aa15.03■□□□□ -0
SMC4-216ENST00000485645 B3GLCTQ6Y288 498 aa15.03■□□□□ -0
SMC4-216ENST00000485645 AAED1Q7RTV5 226 aa15.03■□□□□ -0
SMC4-216ENST00000485645 GPAT4Q86UL3 456 aa15.03■□□□□ -0
SMC4-216ENST00000485645 POMGNT2Q8NAT1 580 aa15.03■□□□□ -0
SMC4-216ENST00000485645 OR9K2Q8NGE7 335 aa15.03■□□□□ -0
SMC4-216ENST00000485645 SLC38A5Q8WUX1 472 aa15.03■□□□□ -0
SMC4-216ENST00000485645 ITCHQ96J02 903 aa15.03■□□□□ -0
SMC4-216ENST00000485645 PIF1Q9H611 641 aa15.03■□□□□ -0
SMC4-216ENST00000485645 MANSC1Q9H8J5 431 aa15.03■□□□□ -0
SMC4-216ENST00000485645 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
SMC4-216ENST00000485645 YAE1D1Q9NRH1 226 aa15.03■□□□□ -0
SMC4-216ENST00000485645 THUMPD1Q9NXG2 353 aaKnown RBP15.03■□□□□ -0
SMC4-216ENST00000485645 ZNF232Q9UNY5 417 aa15.03■□□□□ -0
SMC4-216ENST00000485645 ZNF443Q9Y2A4 671 aaPredicted RBP15.03■□□□□ -0
SMC4-216ENST00000485645 ATP23Q9Y6H3 246 aa15.03■□□□□ -0
SMC4-216ENST00000485645 RTTNQ86VV8 2226 aa15.02■□□□□ -0
SMC4-216ENST00000485645 IGHV4-30-2A0A087WSY4 118 aa15.02■□□□□ -0
SMC4-216ENST00000485645 FAM234BA2RU67 622 aa15.02■□□□□ -0
SMC4-216ENST00000485645 A8MVM7 634 aa15.02■□□□□ -0
SMC4-216ENST00000485645 WNT11O96014 354 aa15.02■□□□□ -0
SMC4-216ENST00000485645 TFPTP0C1Z6 253 aa15.02■□□□□ -0
SMC4-216ENST00000485645 NCF2P19878 526 aaPredicted RBP15.02■□□□□ -0
SMC4-216ENST00000485645 DSCR9P59020 149 aa15.02■□□□□ -0
SMC4-216ENST00000485645 PRPS1P60891 318 aa15.02■□□□□ -0
SMC4-216ENST00000485645 BNIP2Q12982 314 aa15.02■□□□□ -0
SMC4-216ENST00000485645 TMEM225Q6GV28 225 aa15.02■□□□□ -0
SMC4-216ENST00000485645 KLHL24Q6TFL4 600 aa15.02■□□□□ -0
SMC4-216ENST00000485645 MSANTD1Q6ZTZ1 278 aa15.02■□□□□ -0
SMC4-216ENST00000485645 ABHD12BQ7Z5M8 362 aaPredicted RBP15.02■□□□□ -0
SMC4-216ENST00000485645 ZIC4Q8N9L1 334 aa15.02■□□□□ -0
SMC4-216ENST00000485645 ZNF385AQ96PM9 386 aaKnown RBP15.02■□□□□ -0
SMC4-216ENST00000485645 ARMC7Q9H6L4 198 aa15.02■□□□□ -0
SMC4-216ENST00000485645 SDR39U1Q9NRG7 319 aaPredicted RBP15.02■□□□□ -0
SMC4-216ENST00000485645 ARGLU1Q9NWB6 273 aaPredicted RBP15.02■□□□□ -0
SMC4-216ENST00000485645 ADPRHL2Q9NX46 363 aa15.02■□□□□ -0
SMC4-216ENST00000485645 NKIRAS1Q9NYS0 192 aa15.02■□□□□ -0
SMC4-216ENST00000485645 A0A096LPI6 279 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 A0A0G2JPF8 293 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 HNRNPCL2B2RXH8 293 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 HNRNPCL3B7ZW38 293 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 UBDO15205 165 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 HNRNPCL1O60812 293 aaKnown RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 KRT33AO76009 404 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 VAMP5O95183 116 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 HNRNPCL4P0DMR1 293 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 BMP4P12644 408 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 H2AFXP16104 143 aaPredicted RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 CDH2P19022 906 aaPredicted RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 POLR2JP52435 117 aaKnown RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 SLC25A3Q00325 362 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 CHRNB3Q05901 458 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 GTDC1Q4AE62 458 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 RPS26P11Q5JNZ5 115 aaPredicted RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 C6orf10Q5SRN2 563 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 CLIP4Q8N3C7 705 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 OR10H5Q8NGA6 315 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 HTRA1Q92743 480 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 AURKBQ96GD4 344 aaPredicted RBP15.01□□□□□ -0.01
SMC4-216ENST00000485645 TMEM19Q96HH6 336 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 SPATA9Q9BWV2 254 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 IFT52Q9Y366 437 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 ATRQ13535 2644 aa15.01□□□□□ -0.01
SMC4-216ENST00000485645 H7C417 338 aa15□□□□□ -0.01
SMC4-216ENST00000485645 FRS3O43559 492 aa15□□□□□ -0.01
SMC4-216ENST00000485645 PRG2P13727 222 aa15□□□□□ -0.01
SMC4-216ENST00000485645 APOBEC3AP31941 199 aaPredicted RBP15□□□□□ -0.01
SMC4-216ENST00000485645 C1orf140Q5VVS0 124 aa15□□□□□ -0.01
SMC4-216ENST00000485645 CXXC5Q7LFL8 322 aaKnown RBP15□□□□□ -0.01
SMC4-216ENST00000485645 HDXQ7Z353 690 aa15□□□□□ -0.01
SMC4-216ENST00000485645 MAVSQ7Z434 540 aa15□□□□□ -0.01
SMC4-216ENST00000485645 MIER2Q8N344 545 aa15□□□□□ -0.01
SMC4-216ENST00000485645 OR9I1Q8NGQ6 314 aa15□□□□□ -0.01
SMC4-216ENST00000485645 VPS33AQ96AX1 596 aa15□□□□□ -0.01
SMC4-216ENST00000485645 OR52B2Q96RD2 323 aa15□□□□□ -0.01
SMC4-216ENST00000485645 TMEM45AQ9NWC5 275 aa15□□□□□ -0.01
SMC4-216ENST00000485645 PMF1-BGLAPU3KQ54 211 aa15□□□□□ -0.01
SMC4-216ENST00000485645 COL6A5A8TX70 2615 aa15□□□□□ -0.01
SMC4-216ENST00000485645 ELOA3DA6NLF2 546 aaPredicted RBP14.99□□□□□ -0.01
SMC4-216ENST00000485645 A8MV72 311 aaPredicted RBP14.99□□□□□ -0.01
SMC4-216ENST00000485645 KLF11O14901 512 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms