RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SERPINI2O75830 405 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 PRSS23O95084 383 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 RCBTB2O95199 551 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 PMS2P2O95744 297 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 CH25HO95992 272 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 PNMTP11086 282 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 CSNK2A1P68400 391 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 IQCCQ4KMZ1 466 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 OTUD3Q5T2D3 398 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 RIPPLY2Q5TAB7 128 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 ARHGAP24Q8N264 748 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 LRGUKQ96M69 825 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 TM9SF2Q99805 663 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 PSD2Q9BQI7 771 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 FNDC11Q9BVV2 318 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 TIGARQ9NQ88 270 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 AURKCQ9UQB9 309 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 FTCDNL1E5RQL4 147 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 M0R082 166 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 IGHV3-9P01782 118 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 GPIP06744 558 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 HOXD4P09016 255 aaPredicted RBP10.58□□□□□ -0.72
APTX-227ENST00000485479 GRPRP30550 384 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 CHRNB4P30926 498 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 NTF4P34130 210 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 SMSP52788 366 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 RASGEF1BQ0VAM2 473 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 FGD3Q5JSP0 725 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 LINC00114Q6XXX2 140 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 ASRGL1Q7L266 308 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
APTX-227ENST00000485479 BTLAQ7Z6A9 289 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 ZNF417Q8TAU3 575 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 ZNF587Q96SQ5 575 aaPredicted RBP10.58□□□□□ -0.72
APTX-227ENST00000485479 TAPBPLQ9BX59 468 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 NMNAT1Q9HAN9 279 aaPredicted RBP10.58□□□□□ -0.72
APTX-227ENST00000485479 ZNF175Q9Y473 711 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 ENPP4Q9Y6X5 453 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 USP9YO00507 2555 aaPredicted RBP10.58□□□□□ -0.72
APTX-227ENST00000485479 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
APTX-227ENST00000485479 ENO4A6NNW6 628 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 OR5F1O95221 314 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 FABP3P05413 133 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 CTSSP25774 331 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 AGTR1P30556 359 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 IL1RL1Q01638 556 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SPIBQ01892 262 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 EXOC3L2Q2M3D2 409 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 FAM69AQ5T7M9 428 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 TTC33Q6PID6 262 aaPredicted RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 ZDHHC21Q8IVQ6 265 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 ZNF808Q8N4W9 903 aaPredicted RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 CANT1Q8WVQ1 401 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 TMEM239Q8WW34 195 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 STARD4Q96DR4 205 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 PAQR5Q9NXK6 330 aaPredicted RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 TRAV36DV7A0A075B6V5 113 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 HSPB2A8KAH6 182 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 CYTIPO60759 359 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 ATP5HO75947 161 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 CLDN14O95500 239 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 BGLAPP02818 100 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 UMPSP11172 480 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 FCGR2AP12318 317 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 HLA-DOBP13765 273 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 GTF2E2P29084 291 aaKnown RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 RASSF2P50749 326 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 P2RY4P51582 365 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SLC35A1P78382 337 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 H3F3AP84243 136 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SF3B4Q15427 424 aaKnown RBP eCLIP10.57□□□□□ -0.72
APTX-227ENST00000485479 SEC23BQ15437 767 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 HSPB2Q16082 182 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SPATS1Q496A3 300 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SWT1Q5T5J6 900 aaKnown RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 ABLIM2Q6H8Q1 611 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 NRMQ8IXM6 262 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 OFCC1Q8IZS5 231 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 SLC7A13Q8TCU3 470 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 POTEKPQ9BYX7 375 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 C12orf10Q9HB07 376 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 FAM32AQ9Y421 112 aaKnown RBP10.57□□□□□ -0.72
APTX-227ENST00000485479 U3KQV3 271 aa10.57□□□□□ -0.72
APTX-227ENST00000485479 ALPK2Q86TB3 2170 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 A0A087WUU8 490 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 PRSS44E7EML9 344 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 C11orf98E9PRG8 122 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 DVL2O14641 736 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 HPRP00739 348 aa10.56□□□□□ -0.72
APTX-227ENST00000485479 NQO1P15559 274 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms