RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PHC2Q8IXK0 858 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 PEX5LQ8IYB4 626 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 C10orf105Q8TEF2 133 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 FAM168AQ92567 244 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 MOKQ9UQ07 419 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 KRT75O95678 551 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 GPIP06744 558 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 EPHA3P29320 983 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 EFNA4P52798 201 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 MVDP53602 400 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 CHRNB3Q05901 458 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 TNFAIP8L3Q5GJ75 292 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 GPAT4Q86UL3 456 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 ZNF440Q8IYI8 595 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 CADM2Q8N3J6 435 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 OR52P1PQ8NH57 321 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 FBXO17Q96EF6 278 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 AURKBQ96GD4 344 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-205ENST00000485397 KCNK17Q96T54 332 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 ZBTB18Q99592 522 aa16.81■□□□□ 0.28
COL27A1-205ENST00000485397 SF3B5Q9BWJ5 86 aaKnown RBP16.81■□□□□ 0.28
COL27A1-205ENST00000485397 CDHR4A6H8M9 788 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 AQP7P3A6NL99 342 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 RFXANKO14593 260 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 WNT11O96014 354 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 ETFAP13804 333 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 P2RY4P51582 365 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 LGALS3BPQ08380 585 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 MST1LQ2TV78 715 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 CEP85LQ5SZL2 805 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 CLIP4Q8N3C7 705 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 ANKRD42Q8N9B4 389 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 POMGNT2Q8NAT1 580 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 ADPRHL2Q9NX46 363 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 PMF1-BGLAPU3KQ54 211 aa16.8■□□□□ 0.28
COL27A1-205ENST00000485397 YLPM1P49750 1951 aaKnown RBP16.8■□□□□ 0.28
COL27A1-205ENST00000485397 DSPPQ9NZW4 1301 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 CUBNO60494 3623 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 LGI1O95970 557 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 FAM157CP0CG43 387 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 IGHV4-31P0DP07 118 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 KITP10721 976 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 BMP4P12644 408 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 PRG2P13727 222 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 SELENOPP49908 381 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 LRRC74AQ0VAA2 488 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 SWI5Q1ZZU3 235 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 GTDC1Q4AE62 458 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 LIN52Q52LA3 116 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 RPS26P11Q5JNZ5 115 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-205ENST00000485397 HHATQ5VTY9 493 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 TMEM225Q6GV28 225 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 WBP2NLQ6ICG8 309 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 KLHL24Q6TFL4 600 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 PROX1Q92786 737 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 TAPBPLQ9BX59 468 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 PARD6BQ9BYG5 372 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 ZNF443Q9Y2A4 671 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-205ENST00000485397 CHST2Q9Y4C5 530 aa16.79■□□□□ 0.28
COL27A1-205ENST00000485397 STAB1Q9NY15 2570 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 IGHV1-18A0A0C4DH31 117 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 A8MVM7 634 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 HDAC3O15379 428 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 FRS3O43559 492 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 KRT33AO76009 404 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 F12P00748 615 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-205ENST00000485397 BCHEP06276 602 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 TFPTP0C1Z6 253 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 ZNF16P17020 682 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-205ENST00000485397 USF1P22415 310 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-205ENST00000485397 CRATP43155 626 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
COL27A1-205ENST00000485397 TBRG1Q3YBR2 411 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 CYB5R2Q6BCY4 276 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 NXNQ6DKJ4 435 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 GLB1L3Q8NCI6 653 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-205ENST00000485397 OR1K1Q8NGR3 316 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 SLC38A5Q8WUX1 472 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 PIF1Q9H611 641 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 TMEM45AQ9NWC5 275 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 CDC42EP3Q9UKI2 254 aa16.78■□□□□ 0.28
COL27A1-205ENST00000485397 ARFGEF3Q5TH69 2177 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 PHF1O43189 567 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-205ENST00000485397 SLC22A3O75751 556 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 CSF3P09919 207 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 CRISP3P54108 245 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 DSTNP60981 165 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 COPZ1P61923 177 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 PDCD4Q53EL6 469 aaKnown RBP16.77■□□□□ 0.28
COL27A1-205ENST00000485397 C1QTNF12Q5T7M4 302 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 C1orf140Q5VVS0 124 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 CREB3L2Q70SY1 520 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 LINGO2Q7L985 606 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 EPHX4Q8IUS5 362 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 TMEM158Q8WZ71 300 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 TMEM19Q96HH6 336 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 BOD1Q96IK1 185 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 SORCS2Q96PQ0 1159 aa16.77■□□□□ 0.28
COL27A1-205ENST00000485397 ALKBH3Q96Q83 286 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms