RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 OSGIN1Q9UJX0 560 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 TRAV20A0A0B4J274 112 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 EXOC1LA0A1B0GW35 172 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 OR6C65A6NJZ3 312 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF587BE7ETH6 402 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 H3BQF6 201 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 UPK3AO75631 287 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 TFP02787 698 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 HKR1P10072 659 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 MYL2P10916 166 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 SOAT1P35610 550 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 HBA1P69905 142 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 CEACAM7Q14002 265 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 ARHGAP11BQ3KRB8 267 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 CFAP157Q5JU67 520 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 TYW3Q6IPR3 259 aaKnown RBP9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 KRT80Q6KB66 452 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 C1QL2Q7Z5L3 287 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 GPAT4Q86UL3 456 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 KRTCAP2Q8N6L1 136 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 LRRC17Q8N6Y2 441 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 C22orf15Q8WYQ4 148 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 CNOT9Q92600 299 aaKnown RBP9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 CCDC126Q96EE4 140 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 ANKRD27Q96NW4 1050 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 MRPL37Q9BZE1 423 aaKnown RBP9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF275Q9NSD4 429 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 PCDHGB4Q9UN71 923 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
SMARCC1-205ENST00000483847 A0A087WUV0 522 aaPredicted RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 AQP7P3A6NL99 342 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM233B4DJY2 109 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 AZIN1O14977 448 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 CFLARO15519 480 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 NCR1O76036 304 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 PROCP04070 461 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 NEFHP12036 1026 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 CBR1P16152 277 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 MATN1P21941 496 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 ZFP36P26651 326 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 FKBP2P26885 142 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 TACR3P29371 465 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 SEC24CP53992 1094 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 FOXL1Q12952 345 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 DAG1Q14118 895 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 LSM12Q3MHD2 195 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 C8orf74Q6P047 294 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 C16orf62Q7Z3J2 963 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 C6orf120Q7Z4R8 191 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 ABHD12BQ7Z5M8 362 aaPredicted RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 FAM169BQ8N8A8 192 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 MAGEE2Q8TD90 523 aaPredicted RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 RAB8BQ92930 207 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 MOAP1Q96BY2 351 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 DDIT4LQ96D03 193 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 COQ8BQ96D53 544 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 SF3B5Q9BWJ5 86 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 NOX3Q9HBY0 568 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 REV1Q9UBZ9 1251 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 SLC35A3Q9Y2D2 325 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 TMED5Q9Y3A6 229 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 DNAJC15Q9Y5T4 150 aa9.34□□□□□ -0.91
SMARCC1-205ENST00000483847 WNK2Q9Y3S1 2297 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 LIPT2A6NK58 231 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 M0R233 179 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF208O43345 1280 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 PLPP2O43688 288 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 SYNGR3O43761 229 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 RP2O75695 350 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 BCL10O95999 233 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 AK1P00568 194 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ACHEP22303 614 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 PAX7P23759 505 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ECHS1P30084 290 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ALDH3B1P43353 468 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 HTR3AP46098 478 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 P2RY4P51582 365 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 DNAJB13P59910 316 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 KCNJ10P78508 379 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ARF1P84077 181 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ROR2Q01974 943 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 POU3F1Q03052 451 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 FUT5Q11128 374 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 NPRL3Q12980 569 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 MAD2L1BPQ15013 274 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 OR7A5Q15622 319 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 SLC9B1Q4ZJI4 515 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 KANK2Q63ZY3 851 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 NIPAL3Q6P499 406 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 FRRS1Q6ZNA5 592 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 RNF165Q6ZSG1 346 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms