RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FAF1Q9UNN5 650 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-207ENST00000483407 MGAT4BQ9UQ53 548 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 TMED5Q9Y3A6 229 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 ROS1P08922 2347 aa5.18□□□□□ -1.58
CSDE1-207ENST00000483407 RAI1Q7Z5J4 1906 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 IGHV4-30-2A0A087WSY4 118 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 IGHV3-15A0A0B4J1V0 119 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CIB4A0PJX0 185 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 FAM234BA2RU67 622 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 OR5H1A6NKK0 313 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF724A8MTY0 619 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM114B3SHH9 223 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SHISA9B4DS77 424 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF814B7Z6K7 855 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 G3V2L1 256 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 AZIN1O14977 448 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 PHF1O43189 567 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF264O43296 627 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RIPK2O43353 540 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 HOXA3O43365 443 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 EFNA2O43921 213 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CYTIPO60759 359 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RAMP1O60894 148 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SLC43A1O75387 559 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TSPAN15O95858 294 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CD8AP01732 235 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 HMGN2P05204 90 aaKnown RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CSF3P09919 207 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 DHRS4L1P0CG22 281 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RAP2AP10114 183 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 UBL4AP11441 157 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SLC25A16P16260 332 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SDC1P18827 310 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 PTAFRP25105 342 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 GCAP28676 217 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TTKP33981 857 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 HPCAL1P37235 193 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CCR4P51679 360 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ATP12AP54707 1039 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CASP9P55211 416 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 LINC00310P59036 64 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 DNAJB13P59910 316 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RPL38P63173 70 aaKnown RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CSNK2A1P68400 391 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 VLDLRP98155 873 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 PDE7AQ13946 482 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CBFBQ13951 182 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM249Q2WGJ8 235 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SPDYE7PQ495Y7 208 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 KLHL26Q53HC5 615 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ARL13AQ5H913 290 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 DCST2Q5T1A1 773 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CLEC6AQ6EIG7 209 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CDC73Q6P1J9 531 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 C3orf33Q6P1S2 294 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 BHLHB9Q6PI77 547 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SLC22A25Q6T423 547 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 KLHL17Q6TDP4 642 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CBLN3Q6UW01 205 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RNF165Q6ZSG1 346 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 GALNT5Q7Z7M9 940 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 UBE2J2Q8N2K1 259 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 C17orf53Q8N3J3 647 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 NATD1Q8N6N6 113 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 OR56A1Q8NGH5 318 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 OR5W2Q8NH69 310 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CLHC1Q8NHS4 586 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RFWD2Q8NHY2 731 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ADAMTS15Q8TE58 950 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CDS1Q92903 461 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ZHX1-C8orf76Q96EF9 292 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 FAM120BQ96EK7 910 aaKnown RBP5.17□□□□□ -1.58
CSDE1-207ENST00000483407 C16orf58Q96GQ5 468 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 FCRL1Q96LA6 429 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 OR5B2Q96R09 309 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TNFRSF13CQ96RJ3 184 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 DHRS9Q9BPW9 319 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 KLHDC3Q9BQ90 382 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TRMOQ9BU70 441 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CACNG6Q9BXT2 260 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ACTRT3Q9BYD9 372 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CXorf36Q9H7Y0 433 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 SERINC1Q9NRX5 453 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ATAD3AQ9NVI7 634 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RLIMQ9NVW2 624 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 EMC3Q9P0I2 261 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 TBK1Q9UHD2 729 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 MID2Q9UJV3 735 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 ICAM5Q9UMF0 924 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 B3GALT5Q9Y2C3 310 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 FIS1Q9Y3D6 152 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 DTNAQ9Y4J8 743 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 CCL27Q9Y4X3 112 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 COL6A5A8TX70 2615 aa5.17□□□□□ -1.58
CSDE1-207ENST00000483407 RTTNQ86VV8 2226 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NPIPA5A0A0B4J1W7 369 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 GOLGA8QA0A0J9YX86 632 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 UBE2QL1A1L167 161 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms