RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RPLP2P05387 115 aaKnown RBP10.87□□□□□ -0.67
VTI1A-205ENST00000483122 PTAFRP25105 342 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 MPIP34949 423 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 DUSP2Q05923 314 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 PLA2G7Q13093 441 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 HABP2Q14520 560 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-205ENST00000483122 TSC22D1Q15714 1073 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 MPPED2Q15777 294 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 PCGF3Q3KNV8 242 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 TMEM71Q6P5X7 295 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 KCNRGQ8N5I3 272 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 OR52L1Q8NGH7 329 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 NR4A3Q92570 626 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 TCEAL3Q969E4 200 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 UBE2E3Q969T4 207 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 MNTQ99583 582 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 FAM83CQ9BQN1 747 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 C20orf141Q9NUB4 165 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 MIOXQ9UGB7 285 aa10.87□□□□□ -0.67
VTI1A-205ENST00000483122 A0A0D9SG52 128 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 TRBV2A0A0J9YWF9 115 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 GREM1O60565 184 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 ICOSLGO75144 302 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LATS1O95835 1130 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 OLFM2O95897 454 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 ACTL6AO96019 429 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 S100A9P06702 114 aaKnown RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LAG3P18627 525 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 SLC2A5P22732 501 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 EDNRAP25101 427 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 TMEM115Q12893 351 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 CRMP1Q14194 572 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 C4orf46Q504U0 113 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 RAB12Q6IQ22 244 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 SLC39A5Q6ZMH5 540 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LNX2Q8N448 690 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 PHOSPHO1Q8TCT1 267 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 VRK1Q99986 396 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 CMC2Q9NRP2 79 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 MARCH5Q9NX47 278 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 SIDT1Q9NXL6 827 aaKnown RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 PMS2P1A4D2B8 440 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LRIT2A6NDA9 550 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 SYNDIG1LA6NDD5 238 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 EFCAB7A8K855 629 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 MAN2B1O00754 1011 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 BCL2L11O43521 198 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 OR2T1O43869 369 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 ERAL1O75616 437 aaKnown RBP10.86□□□□□ -0.67
VTI1A-205ENST00000483122 GATMP50440 423 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 PNLIPRP2P54317 469 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 NDUFAF6Q330K2 333 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 C10orf91Q5T1B1 145 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 C22orf39Q6P5X5 142 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 UNQ9370/PRO34162Q6UXP9 181 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 WDR88Q6ZMY6 472 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 ING5Q8WYH8 240 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 HAVCR1Q96D42 359 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 HS6ST2Q96MM7 605 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 OR7D2Q96RA2 312 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 LRFN2Q9ULH4 789 aa10.86□□□□□ -0.67
VTI1A-205ENST00000483122 PLXNA2O75051 1894 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 A0A087WV48 116 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 MEIS3P1A6NDR6 274 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 FAM86C2PA6NEL3 165 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TTLL8A6PVC2 850 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 FCMRO60667 390 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 C8orf89P0DMQ9 161 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 BMP7P18075 431 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ITPKBP27987 946 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TAS2R38P59533 333 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 SIRPAP78324 504 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 STX4Q12846 297 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ECH1Q13011 328 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ATXN7L3Q14CW9 347 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 MLC1Q15049 377 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TEAD2Q15562 447 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 PLEKHN1Q494U1 663 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 MRM1Q6IN84 353 aaKnown RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 FUT10Q6P4F1 479 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ZCCHC12Q6PEW1 402 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 CORO6Q6QEF8 472 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 PGAP1Q75T13 922 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 UBE3DQ7Z6J8 389 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 GLB1L2Q8IW92 636 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 OR51S1Q8NGJ8 323 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ELP5Q8TE02 316 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 ZMYND19Q96E35 227 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-205ENST00000483122 FBXO17Q96EF6 278 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 BBS4Q96RK4 519 aa10.85□□□□□ -0.67
VTI1A-205ENST00000483122 CD180Q99467 661 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms