RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KTI12Q96EK9 354 aaPredicted RBP18.61■□□□□ 0.57
SEC13-217ENST00000482647 EPYCQ99645 322 aa18.61■□□□□ 0.57
SEC13-217ENST00000482647 POLR2J2Q9GZM3 115 aaKnown RBP18.61■□□□□ 0.57
SEC13-217ENST00000482647 POLR2J3Q9H1A7 115 aaKnown RBP18.61■□□□□ 0.57
SEC13-217ENST00000482647 C12orf49Q9H741 205 aa18.61■□□□□ 0.57
SEC13-217ENST00000482647 FANCFQ9NPI8 374 aa18.61■□□□□ 0.57
SEC13-217ENST00000482647 EGFL7Q9UHF1 273 aa18.61■□□□□ 0.57
SEC13-217ENST00000482647 IGKV1D-42A0A075B6H8 117 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 TRAV36DV7A0A075B6V5 113 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 GPR171O14626 319 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 AKR7A3O95154 331 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 KIR2DL3P43628 341 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 PCYT1AP49585 367 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 SLC16A1P53985 500 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 TAS2R41P59536 307 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 SORDQ00796 357 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 OTUD3Q5T2D3 398 aaPredicted RBP18.6■□□□□ 0.57
SEC13-217ENST00000482647 LINC00114Q6XXX2 140 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 DEF8Q6ZN54 512 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 NUFIP2Q7Z417 695 aaKnown RBP18.6■□□□□ 0.57
SEC13-217ENST00000482647 ZNF775Q96BV0 537 aaPredicted RBP18.6■□□□□ 0.57
SEC13-217ENST00000482647 MPP4Q96JB8 637 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 TMEM43Q9BTV4 400 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 PTDSS2Q9BVG9 487 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 CD300AQ9UGN4 299 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 RPS6KA6Q9UK32 745 aa18.6■□□□□ 0.57
SEC13-217ENST00000482647 AQP7P3A6NL99 342 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 ZNF716A6NP11 495 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 ZNF814B7Z6K7 855 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 FTCDNL1E5RQL4 147 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 T-ENOLP0DO92 83 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 TCN1P20061 433 aaPredicted RBP18.59■□□□□ 0.57
SEC13-217ENST00000482647 GTF2E2P29084 291 aaKnown RBP18.59■□□□□ 0.57
SEC13-217ENST00000482647 CD79BP40259 229 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 EXOC3L2Q2M3D2 409 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 FAM69AQ5T7M9 428 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 TMEM225Q6GV28 225 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 BEND4Q6ZU67 534 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 FKBP9P1Q75LS8 142 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 VTCN1Q7Z7D3 282 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 P3H2Q8IVL5 708 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 TMEM99Q8N816 258 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 FAM156AQ8NDB6 213 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 RBM15BQ8NDT2 890 aaKnown RBP18.59■□□□□ 0.57
SEC13-217ENST00000482647 OR6S1Q8NH40 331 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 TAAR8Q969N4 342 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 SLC41A3Q96GZ6 507 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 ZNF300Q96RE9 604 aaPredicted RBP18.59■□□□□ 0.57
SEC13-217ENST00000482647 SF3B5Q9BWJ5 86 aaKnown RBP18.59■□□□□ 0.57
SEC13-217ENST00000482647 KCNN3Q9UGI6 736 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 SLC7A7Q9UM01 511 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 NBPF19A0A087WUL8 3843 aa18.59■□□□□ 0.57
SEC13-217ENST00000482647 TUBAL3A6NHL2 446 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 RAMP1O60894 148 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 VAMP5O95183 116 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 OR5F1O95221 314 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 THY1P04216 161 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 IFNW1P05000 195 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 POU2F1P14859 743 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 IFNA8P32881 189 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 FAM27E3Q08E93 113 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 SNTB1Q13884 538 aaKnown RBP18.58■□□□□ 0.56
SEC13-217ENST00000482647 MFSD13AQ14CX5 517 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 FXNQ16595 210 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 IFI44LQ53G44 452 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 TTC33Q6PID6 262 aaPredicted RBP18.58■□□□□ 0.56
SEC13-217ENST00000482647 GDF7Q7Z4P5 450 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 TSPYL5Q86VY4 417 aaPredicted RBP18.58■□□□□ 0.56
SEC13-217ENST00000482647 GEMIN6Q8WXD5 167 aaKnown RBP18.58■□□□□ 0.56
SEC13-217ENST00000482647 GORASP2Q9H8Y8 452 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 MAGEL2Q9UJ55 1249 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 RIMS3Q9UJD0 308 aa18.58■□□□□ 0.56
SEC13-217ENST00000482647 NOSIPQ9Y314 301 aaKnown RBP18.58■□□□□ 0.56
SEC13-217ENST00000482647 LYPD3O95274 346 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 THRBP10828 461 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 PIN1Q13526 163 aaPredicted RBP18.57■□□□□ 0.56
SEC13-217ENST00000482647 SLC17A1Q14916 467 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 TFAP2EQ6VUC0 442 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 GPAT4Q86UL3 456 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 ZNF100Q8IYN0 542 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 ARHGAP24Q8N264 748 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 HSH2DQ96JZ2 352 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 SLC19A3Q9BZV2 496 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 DCAF13Q9NV06 445 aaKnown RBP18.57■□□□□ 0.56
SEC13-217ENST00000482647 C6orf203Q9P0P8 240 aaPredicted RBP18.57■□□□□ 0.56
SEC13-217ENST00000482647 SAMD4AQ9UPU9 718 aaKnown RBP18.57■□□□□ 0.56
SEC13-217ENST00000482647 RASD1Q9Y272 281 aa18.57■□□□□ 0.56
SEC13-217ENST00000482647 PKDREJQ9NTG1 2253 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 C16orf97H3BN30 126 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 MRPL33O75394 65 aaKnown RBP18.56■□□□□ 0.56
SEC13-217ENST00000482647 MSX2P35548 267 aaPredicted RBP18.56■□□□□ 0.56
SEC13-217ENST00000482647 UGT2B10P36537 528 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 OR3A2P47893 321 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 WDR88Q6ZMY6 472 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 RINLQ6ZS11 566 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 C10orf53Q8N6V4 93 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 FAM222BQ8WU58 562 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 AMBRA1Q9C0C7 1298 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 C1orf21Q9H246 121 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 PARPBPQ9NWS1 579 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms