RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CYP1B1Q16678 543 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 EXOC3L2Q2M3D2 409 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PRAMEF5Q5TYX0 476 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 AGAP6Q5VW22 663 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PRAMEF6Q5VXH4 476 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PTRHD1Q6GMV3 140 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 SHISA6Q6ZSJ9 500 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 COX15Q7KZN9 410 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 ERASQ7Z444 233 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 KCNMB4Q86W47 210 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 ZC3HC1Q86WB0 502 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 MEX3DQ86XN8 651 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 SLC34A3Q8N130 599 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 C2orf73Q8N5S3 287 aaPredicted RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 SPATA4Q8NEY3 305 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 OR13J1Q8NGT2 312 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 OR4L1Q8NH43 312 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 OR4A16Q8NH70 328 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 LKAAEAR1Q8TD35 194 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 GRHL3Q8TE85 626 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 CHPT1Q8WUD6 406 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 MOCOSQ96EN8 888 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 ZC3HAV1LQ96H79 300 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 IL17FQ96PD4 163 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 SNX18Q96RF0 628 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PRR25Q96S07 402 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 RANBP9Q96S59 729 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PCGF1Q9BSM1 259 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 NSRP1Q9H0G5 558 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 MAGT1Q9H0U3 335 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 DNTTIP1Q9H147 329 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 TREM1Q9NP99 234 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 CTSFQ9UBX1 484 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 GNPTGQ9UJJ9 305 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PACSIN2Q9UNF0 486 aaPredicted RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 PKDREJQ9NTG1 2253 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 APCP25054 2843 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 NSG1A0A0A6YYJ2 146 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 A0A1B0GUH1 482 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 GABRR3A8MPY1 467 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PRSS44E7EML9 344 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZNF701M0R085 212 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 PRYO14603 147 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PRMT5O14744 637 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 NME2P1O60361 137 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 TGM6O95932 706 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 HPP00738 406 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 KRT6AP02538 564 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 FESP07332 822 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 CPA3P15088 417 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZNF44P15621 663 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 S1PR1P21453 382 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 CXCR2P25025 360 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 DPP4P27487 766 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PSMB5P28074 263 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 CMPK1P30085 196 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ALDH3B1P43353 468 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 OR3A1P47881 315 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 OR1D4P47884 311 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 EEF1A2Q05639 463 aaKnown RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 KLC1Q07866 573 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 MFAP5Q13361 173 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ETFDHQ16134 617 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 HIKESHIQ53FT3 197 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ARL13AQ5H913 290 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 AGBL2Q5U5Z8 902 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 SUMO4Q6EEV6 95 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PRMT9Q6P2P2 845 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 IGFL2Q6UWQ7 119 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 BTNL8Q6UX41 500 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PQLC2Q6ZP29 291 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZNF534Q76KX8 674 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 LINGO2Q7L985 606 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 FJX1Q86VR8 437 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 KLBQ86Z14 1044 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 STHQ8IWL8 128 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PRSS58Q8IYP2 241 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 LRRC57Q8N9N7 239 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 LMNTD1Q8N9Z9 388 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 OR11G2Q8NGC1 345 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 MAGEC3Q8TD91 643 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 FAR1Q8WVX9 515 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 SNAPC3Q92966 411 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 RFKQ969G6 155 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 R3HDM4Q96D70 268 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 PBKQ96KB5 322 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 SFXN2Q96NB2 322 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 CITED1Q99966 193 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 TMEM43Q9BTV4 400 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ABHD14AQ9BUJ0 271 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 MEAF6Q9HAF1 191 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ZNF160Q9HCG1 818 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 GPR173Q9NS66 373 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 C14orf105Q9NVL8 296 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ONECUT1Q9UBC0 465 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 RNF14Q9UBS8 474 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms