RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ATP5J2P56134 94 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 CYP51A1Q16850 503 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 TMEM99Q8N816 258 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 POMGNT2Q8NAT1 580 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 OR9K2Q8NGE7 335 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 STK35Q8TDR2 534 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 SLC25A36Q96CQ1 311 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 PIF1Q9H611 641 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 MRGBPQ9NV56 204 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 SLAMF8Q9P0V8 285 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 MGAT4BQ9UQ53 548 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 ITPR3Q14573 2671 aa17.55■□□□□ 0.4
MSH5-215ENST00000482280 FRS3O43559 492 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 TROVE2P10155 538 aaKnown RBP eCLIP17.54■□□□□ 0.4
MSH5-215ENST00000482280 PNMTP11086 282 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 HOXC5Q00444 222 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 ZNF672Q499Z4 452 aaPredicted RBP17.54■□□□□ 0.4
MSH5-215ENST00000482280 C5orf46Q6UWT4 87 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 DHDDSQ86SQ9 333 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 ARMC8Q8IUR7 673 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 PIAS4Q8N2W9 510 aaPredicted RBP17.54■□□□□ 0.4
MSH5-215ENST00000482280 HIPK4Q8NE63 616 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 OR52E4Q8NGH9 312 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 SMAP2Q8WU79 429 aaPredicted RBP17.54■□□□□ 0.4
MSH5-215ENST00000482280 DNAJA4Q8WW22 397 aaPredicted RBP17.54■□□□□ 0.4
MSH5-215ENST00000482280 TMEM45BQ96B21 275 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 C3orf49Q96BT1 292 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 TRIM2Q9C040 744 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 TMEM38AQ9H6F2 299 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 DLL4Q9NR61 685 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 RASD1Q9Y272 281 aa17.54■□□□□ 0.4
MSH5-215ENST00000482280 MAGED1Q9Y5V3 778 aaPredicted RBP17.54■□□□□ 0.4
MSH5-215ENST00000482280 OR6C65A6NJZ3 312 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 ABCD4O14678 606 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 OR2T1O43869 369 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 EDF1O60869 148 aaKnown RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 VIMP08670 466 aaKnown RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 HOXB9P17482 250 aaPredicted RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 GPX2P18283 190 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 AQP1P29972 269 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 ZNF83P51522 516 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 CDH11P55287 796 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 RGS8P57771 180 aaPredicted RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 IL1RL1Q01638 556 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 NFYCQ13952 458 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 C9orf135Q5VTT2 229 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 METTL21CQ5VZV1 264 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 DHRS4L2Q6PKH6 230 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 ATG4DQ86TL0 474 aaPredicted RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 RANBP3LQ86VV4 465 aaPredicted RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 MSRB3Q8IXL7 192 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 C17orf78Q8N4C9 275 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 C11orf65Q8NCR3 313 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 C1orf162Q8NEQ5 155 aaPredicted RBP17.53■□□□□ 0.4
MSH5-215ENST00000482280 KBTBD8Q8NFY9 601 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 MFSD8Q8NHS3 518 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 SLCO5A1Q9H2Y9 848 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 EVA1AQ9H8M9 152 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 C12orf10Q9HB07 376 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 TMEM27Q9HBJ8 222 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 AMDHD2Q9Y303 409 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 GMEB1Q9Y692 573 aa17.53■□□□□ 0.4
MSH5-215ENST00000482280 DPRXA6NFQ7 191 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 CDH2P19022 906 aaPredicted RBP17.52■□□□□ 0.4
MSH5-215ENST00000482280 PTAFRP25105 342 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 MPGP29372 298 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 RPS5P46782 204 aaKnown RBP17.52■□□□□ 0.4
MSH5-215ENST00000482280 ALG10BQ5I7T1 473 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 TSPO2Q5TGU0 170 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 ULK3Q6PHR2 472 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 SLC22A25Q6T423 547 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 TSPEARQ8WU66 669 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 SLC38A4Q969I6 547 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 SLC7A10Q9NS82 523 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 CISD1Q9NZ45 108 aaKnown RBP17.52■□□□□ 0.4
MSH5-215ENST00000482280 TESQ9UGI8 421 aaKnown RBP17.52■□□□□ 0.4
MSH5-215ENST00000482280 CHST2Q9Y4C5 530 aa17.52■□□□□ 0.4
MSH5-215ENST00000482280 AKAP9Q99996 3911 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 ZNF587BE7ETH6 402 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 H7C1Q1 480 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 M0R1B8 84 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 WNT11O96014 354 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 ZNF43P17038 809 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 PRPS1P60891 318 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 RBBP4Q09028 425 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 C1DQ13901 141 aaKnown RBP17.51■□□□□ 0.39
MSH5-215ENST00000482280 GABRA6Q16445 453 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 C1QTNF12Q5T7M4 302 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 CLEC9AQ6UXN8 241 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 KRTAP1-3Q8IUG1 177 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 SLC30A8Q8IWU4 369 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 LSMEM1Q8N8F7 131 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 SLC26A7Q8TE54 656 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 SLC47A1Q96FL8 570 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 MUS81Q96NY9 551 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 EPYCQ99645 322 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 CPPED1Q9BRF8 314 aaPredicted RBP17.51■□□□□ 0.39
MSH5-215ENST00000482280 GSX1Q9H4S2 264 aaPredicted RBP17.51■□□□□ 0.39
MSH5-215ENST00000482280 SLC52A3Q9NQ40 469 aa17.51■□□□□ 0.39
MSH5-215ENST00000482280 ZNF701Q9NV72 531 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms