RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ZNF208O43345 1280 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 AKR7A3O95154 331 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 CRYAAP02489 173 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 CHRM4P08173 479 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 ETFAP13804 333 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 HNF1AP20823 631 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 CD40P25942 277 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 PGM1P36871 562 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 POLR2JP52435 117 aaKnown RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 MAP2K6P52564 334 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 MAGOHP61326 146 aaKnown RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 SNRPD2P62316 118 aaKnown RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 VLDLRP98155 873 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 LOXL1Q08397 574 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 PDK3Q15120 406 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 GSTA3Q16772 222 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 ZSWIM7Q19AV6 140 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 ZNF311Q5JNZ3 666 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 ABLIM2Q6H8Q1 611 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 NIPAL3Q6P499 406 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 PAQR6Q6TCH4 344 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 DTX2Q86UW9 622 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 GPR137CQ8N3F9 429 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 OR9K2Q8NGE7 335 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 OR52E4Q8NGH9 312 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 FAM168AQ92567 244 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 HTRA1Q92743 480 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 FBXO17Q96EF6 278 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 AURKBQ96GD4 344 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 TNFRSF13CQ96RJ3 184 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 KCNK17Q96T54 332 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 DHRS9Q9BPW9 319 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 INPP5KQ9BT40 448 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 SPATA5L1Q9BVQ7 753 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 TRIM2Q9C040 744 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 AMBRA1Q9C0C7 1298 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 GRIP2Q9C0E4 1043 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 CBLN4Q9NTU7 201 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 AIG1Q9NVV5 245 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-205ENST00000480127 KCNE5Q9UJ90 142 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 OSGIN1Q9UJX0 560 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 B3GALT5Q9Y2C3 310 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 IFT52Q9Y366 437 aa6.23□□□□□ -1.41
COL17A1-205ENST00000480127 IGKV3D-15A0A087WSY6 115 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 A0A096LPI6 279 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 OR6C65A6NJZ3 312 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 A8MVM7 634 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 EVPLLA8MZ36 301 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 SHISA9B4DS77 424 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 NR5A2O00482 541 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 SDHDO14521 159 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 SERPINI2O75830 405 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ZNF43P17038 809 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 COX5AP20674 150 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 MPGP29372 298 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 LSP1P33241 339 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 TTKP33981 857 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 IRX1P78414 480 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-205ENST00000480127 EPS8Q12929 822 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 NPRL3Q12980 569 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 BNIP2Q12982 314 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 GGTLC2Q14390 218 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 RPS26P11Q5JNZ5 115 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-205ENST00000480127 COX20Q5RI15 118 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 EXOSC6Q5RKV6 272 aaKnown RBP6.22□□□□□ -1.41
COL17A1-205ENST00000480127 C1orf140Q5VVS0 124 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 OGFOD2Q6N063 350 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ZNF836Q6ZNA1 936 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 VRK2Q86Y07 508 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ADGRG3Q86Y34 549 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 C17orf78Q8N4C9 275 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ARIH2OSQ8N7S6 290 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 VPS33AQ96AX1 596 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ZG16BQ96DA0 208 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ALKBH3Q96Q83 286 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ZNF607Q96SK3 696 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 SORT1Q99523 831 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 SLC38A1Q9H2H9 487 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 TPT1P8Q9HAU6 139 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 DYNLRB1Q9NP97 96 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 B3GAT2Q9NPZ5 323 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 RLIMQ9NVW2 624 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 LPAR3Q9UBY5 353 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 MALT1Q9UDY8 824 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 DCTN4Q9UJW0 460 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 MOKQ9UQ07 419 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 ZNF443Q9Y2A4 671 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-205ENST00000480127 NOX1Q9Y5S8 564 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 FLVCR1Q9Y5Y0 555 aa6.22□□□□□ -1.41
COL17A1-205ENST00000480127 A0A096LPE4 126 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 A0A0G2JPF8 293 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 A0A1W2PPZ6 126 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 LIPT2A6NK58 231 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HNRNPCL2B2RXH8 293 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HNRNPCL3B7ZW38 293 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 ATP6V1G2-DDX39BF2Z307 99 aa6.21□□□□□ -1.42
COL17A1-205ENST00000480127 HNRNPCL1O60812 293 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms