RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SURF4O15260 269 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SOX15O60248 233 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 HLA-HP01893 362 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 HNRNPA2B1P22626 353 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TUBG1P23258 451 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 EIF1P41567 113 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ERVK-16P61578 105 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SLC14A1Q13336 389 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 POU4F3Q15319 338 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TECPR1Q7Z6L1 1165 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PRSS58Q8IYP2 241 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 MDGA1Q8NFP4 955 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR9A2Q8NGT5 310 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR1S1Q8NH92 325 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 EMG1Q92979 244 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR5M11Q96RB7 305 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SYNPO2LQ9H987 977 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RARRES3Q9UL19 164 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RIMBP3CA6NJZ7 1639 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RIMBP3BA6NNM3 1639 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RIMBP3Q9UFD9 1639 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ARID1AO14497 2285 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TNFRSF10CO14798 259 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 HCRTO43612 131 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 GLCEO94923 617 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CNOT4O95628 575 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 IGHG1P01857 330 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RHOP08100 348 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ELNP15502 786 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 IMPA1P29218 277 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 MC3RP41968 323 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF133P52736 654 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 F2RL1P55085 397 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 H3F3AP84243 136 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 REEP5Q00765 189 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CYP27C1Q4G0S4 372 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZBTB37Q5TC79 503 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR2G6Q5TZ20 316 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SAXO2Q658L1 398 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 C1orf94Q6P1W5 598 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PAQR9Q6ZVX9 377 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ST8SIA4Q92187 359 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 LIN37Q96GY3 246 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PKMYT1Q99640 499 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 METTL9Q9H1A3 318 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 IGFLR1Q9H665 355 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SFXN1Q9H9B4 322 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ACER3Q9NUN7 267 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 A0A087WZY1 265 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TRAV1-2A0A0B4J238 106 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 UMAD1C9J7I0 102 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 NPIPB8E9PQR5 432 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TRIM77I1YAP6 450 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CYB5BO43169 146 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 EIF1BO60739 113 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RNGTTO60942 597 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 NID1P14543 1247 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CBLP22681 906 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TEAD1P28347 426 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PPT1P50897 306 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 EPHA5P54756 1037 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 SORDQ00796 357 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 FOXK2Q01167 660 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TRNP1Q6NT89 227 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ABHD12BQ7Z5M8 362 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF679Q8IYX0 411 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 MFSD9Q8NBP5 474 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 STT3BQ8TCJ2 826 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 YIPF5Q969M3 257 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 P2RY12Q9H244 342 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZNF385DQ9H6B1 395 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 NTN4Q9HB63 628 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PLEKHJ1Q9NW61 149 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 VNN3Q9NY84 501 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR52A1Q9UKL2 312 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 EXO1Q9UQ84 846 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ADAM18Q9Y3Q7 739 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PCDHGA6Q9Y5G7 932 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 VIRMAQ69YN4 1812 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 TCHHQ07283 1943 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PSMD9O00233 223 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR7A17O14581 309 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 YKT6O15498 198 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 FADS1O60427 444 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 C1orf105O95561 183 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 LPLP06858 475 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PRR35P0CG20 571 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CLDN6P56747 220 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 RTP2Q5QGT7 225 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 GALNT10Q86SR1 603 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ANKLE1Q8NAG6 615 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 OR14L1PQ8NHC6 308 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 ZDHHC1Q8WTX9 485 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 MARVELD3Q96A59 401 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 IL21RQ9HBE5 538 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 PRDM9Q9NQV7 894 aa5.72□□□□□ -1.49
PRPF4B-205ENST00000480058 CYSLTR2Q9NS75 346 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms