RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MED30Q96HR3 178 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 OR2M2Q96R28 347 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 INTS14Q96SY0 518 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 C2orf42Q9NWW7 574 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 PTTG3PQ9NZH4 202 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 SLC17A4Q9Y2C5 497 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 F13BP05160 661 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 FBXO45P0C2W1 286 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 AKR1C4P17516 323 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 APEX1P27695 318 aaKnown RBP13.27□□□□□ -0.28
COL20A1-206ENST00000479501 GALK2Q01415 458 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 SLC35B4Q969S0 331 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 INIPQ9NRY2 104 aa13.27□□□□□ -0.28
COL20A1-206ENST00000479501 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 PIPP12273 146 aaPredicted RBP13.27□□□□□ -0.29
COL20A1-206ENST00000479501 GLP1RP43220 463 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 CDKN3Q16667 212 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 SOWAHCQ53LP3 525 aaPredicted RBP13.27□□□□□ -0.29
COL20A1-206ENST00000479501 GPR139Q6DWJ6 353 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 LRRC28Q86X40 367 aaPredicted RBP13.27□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF547Q8IVP9 402 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 DDIT4LQ96D03 193 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 STACQ99469 402 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 RHNO1Q9BSD3 238 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 CDCA4Q9BXL8 241 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 CHST8Q9H2A9 424 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 DHCR7Q9UBM7 475 aaKnown RBP13.27□□□□□ -0.29
COL20A1-206ENST00000479501 CCL27Q9Y4X3 112 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 TUBG1P23258 451 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 GLO1Q04760 184 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 DHRS4L2Q6PKH6 230 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 GSG1LQ6UXU4 331 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 SERPINA12Q8IW75 414 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 SLC25A18Q9H1K4 315 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 SERGEFQ9UGK8 458 aa13.27□□□□□ -0.29
COL20A1-206ENST00000479501 TRPM6Q9BX84 2022 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 POM121CA8CG34 1229 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 BCAT2O15382 392 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 FABP7O15540 132 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 FGF17O60258 216 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 RRAS2P62070 204 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ZP2Q05996 745 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 RAB11BQ15907 218 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 PRSS36Q5K4E3 855 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 SLC6A19Q695T7 634 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF529Q6P280 563 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 NANOGP1Q8N7R0 232 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF417Q8TAU3 575 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 WDR77Q9BQA1 342 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 GLTPQ9NZD2 209 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 SLC6A5Q9Y345 797 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 SCN4AP35499 1836 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 SCN10AQ9Y5Y9 1956 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TLCD2A6NGC4 264 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 LINC01565O15544 149 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TRHRP34981 398 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TPRA1Q86W33 373 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 NIPAL2Q9H841 368 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ATP13A2Q9NQ11 1180 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 MEGF11A6BM72 1044 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 HSPA12AO43301 675 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 RAD1O60671 282 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF43P17038 809 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 LSSP48449 732 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 GPNMBQ14956 572 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 MLF2Q15773 248 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 NKAPLQ5M9Q1 402 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 FAM69AQ5T7M9 428 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ETFBKMTQ8IXQ9 262 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 OR5T2Q8NGG2 359 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TCTEX1D2Q8WW35 142 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 CTRCQ99895 268 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 STRADBQ9C0K7 418 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF226Q9NYT6 803 aa13.26□□□□□ -0.29
COL20A1-206ENST00000479501 CABIN1Q9Y6J0 2220 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 TEX51A0A1B0GUA7 166 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 H7C417 338 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 UPK1AO00322 258 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 SLC16A7O60669 478 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ERCC1P07992 297 aaPredicted RBP13.25□□□□□ -0.29
COL20A1-206ENST00000479501 THBS1P07996 1170 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ARSBP15848 533 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ITGB8P26012 769 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF84P51523 738 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ARHGAP11BQ3KRB8 267 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 MED25Q71SY5 747 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 KCTD20Q7Z5Y7 419 aa13.25□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF565Q8N9K5 539 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms