RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ITPKBP27987 946 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 EIF2S3P41091 472 aaKnown RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 RBM34P42696 430 aaKnown RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 SLC1A3P43003 542 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 HSPA13P48723 471 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 IDH2P48735 452 aaKnown RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 DAPP51397 102 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ARHGDIAP52565 204 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 UGT2B15P54855 530 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 OC90Q02509 493 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 TLE3Q04726 772 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FOXF1Q12946 379 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FOXD4Q12950 439 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 CBFBQ13951 182 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 OR1C1Q15619 314 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 INPP5JQ15735 1006 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 TOMM34Q15785 309 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 ALG10BQ5I7T1 473 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 KDM4DQ6B0I6 523 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 OR5M10Q6IEU7 315 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 PGBD2Q6P3X8 592 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ULK3Q6PHR2 472 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 IGFL2Q6UWQ7 119 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ZNF730Q6ZMV8 503 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MBOAT2Q6ZWT7 520 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 LINC00471Q8N535 108 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 WDSUB1Q8N9V3 476 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ATG16L2Q8NAA4 619 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 AQP11Q8NBQ7 271 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MDS2Q8NDY4 140 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FDCSPQ8NFU4 85 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 OR4K17Q8NGC6 315 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 PIGXQ8TBF5 258 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 DNAJC9Q8WXX5 260 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ST8SIA1Q92185 356 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 SLC38A4Q969I6 547 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 C1GALT1C1Q96EU7 318 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MPP4Q96JB8 637 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 RDH12Q96NR8 316 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 SIGLEC12Q96PQ1 595 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MBOAT4Q96T53 435 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FEVQ99581 238 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 DGCR6LQ9BY27 220 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 GABARAPL3Q9BY60 117 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 DSN1Q9H410 356 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 C12orf10Q9HB07 376 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 SDHAF3Q9NRP4 125 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 DEPPQ9NTK1 212 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MED17Q9NVC6 651 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 SMPD3Q9NY59 655 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 TAS2R10Q9NYW0 307 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 PLA2G3Q9NZ20 509 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 STMN3Q9NZ72 180 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MED11Q9P086 117 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 LRFN1Q9P244 771 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FBXL2Q9UKC9 423 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 PRDM4Q9UKN5 801 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 MGAT4BQ9UQ53 548 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 FREM3P0C091 2139 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 DNAJC13O75165 2243 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ZNF407Q9C0G0 2248 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 TNRC6AQ8NDV7 1962 aaKnown RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 NCKAP5O14513 1909 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 A0A087WUJ7 227 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PINLYPA6NC86 204 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 K7ENP7 123 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 RRP8O43159 456 aaKnown RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 NME2P1O60361 137 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 OR10H3O60404 316 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 SNAP29O95721 258 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 NUDT14O95848 222 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PNMTP11086 282 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PTNP21246 168 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 FPR3P25089 353 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TACR3P29371 465 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 IFNGR2P38484 337 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 OMPP47874 163 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 GSSP48637 474 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 MASP1P48740 699 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 DNASE1L1P49184 302 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 CCL11P51671 97 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 ZNF41P51814 821 aaPredicted RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 POLR2HP52434 150 aaKnown RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 FOXO1Q12778 655 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 MERTKQ12866 999 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 KCNAB2Q13303 367 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PLPPR5Q32ZL2 321 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 RFX4Q33E94 735 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 SLC25A53Q5H9E4 307 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 NHSL2Q5HYW2 709 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TIGD3Q6B0B8 471 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 SPINK14Q6IE38 97 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 C1orf94Q6P1W5 598 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 INO80CQ6PI98 192 aaPredicted RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 ARSKQ6UWY0 536 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 CD300LDQ6UXZ3 194 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 GRINAQ7Z429 371 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms