RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 LIX1LQ8IVB5 337 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 SLC7A6OSQ96CW6 309 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 ASB9Q96DX5 294 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 AMBRA1Q9C0C7 1298 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 BCO1Q9HAY6 547 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 EMC3Q9P0I2 261 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 KLHL13Q9P2N7 655 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 ENPP4Q9Y6X5 453 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 CACNA1CQ13936 2221 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 IGKV3D-15A0A087WSY6 115 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 FAM90A27PA6NNH2 459 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 SMAD9O15198 467 aaKnown RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 FZD7O75084 574 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 CD8BP10966 210 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 HOXB6P17509 224 aaKnown RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 PEX19P40855 299 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 PCYT1AP49585 367 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 SLC16A1P53985 500 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 EGR4Q05215 589 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 OR7A5Q15622 319 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 LCN8Q6JVE9 175 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 PLXDC2Q6UX71 529 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 GDF7Q7Z4P5 450 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 STK32CQ86UX6 486 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 ABHD3Q8WU67 409 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 STARD4Q96DR4 205 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 FNDC11Q9BVV2 318 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 SF3B5Q9BWJ5 86 aaKnown RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 MMADHCQ9H3L0 296 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-205ENST00000477508 FANCFQ9NPI8 374 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 A4GNTQ9UNA3 340 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 CORINQ9Y5Q5 1042 aa11.71□□□□□ -0.53
TOP3A-205ENST00000477508 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 IGHV3-15A0A0B4J1V0 119 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 EEF1E1-BLOC1S5C9J1V9 151 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 FTCDNL1E5RQL4 147 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PRSS44E7EML9 344 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 EBAG9O00559 213 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PDE5AO76074 875 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 LYPD3O95274 346 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 MT-ATP6P00846 226 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 IGF2P01344 180 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 RHCEP18577 417 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 AGTR1P30556 359 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 RPS5P46782 204 aaKnown RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 SIRPAP78324 504 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 CBX1P83916 185 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 TRAM2Q15035 370 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 OTUD3Q5T2D3 398 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 ABLIM2Q6H8Q1 611 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PGM2L1Q6PCE3 622 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 TSPYL5Q86VY4 417 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 OFCC1Q8IZS5 231 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 SCAIQ8N9R8 606 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 RELL2Q8NC24 303 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 RNASE6Q93091 150 aaKnown RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 TAAR8Q969N4 342 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PSD2Q9BQI7 771 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PRSS27Q9BQR3 290 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PTDSS2Q9BVG9 487 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 UCK2Q9BZX2 261 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 ANKRD19PQ9H560 264 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PLSCR4Q9NRQ2 329 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 JKAMPQ9P055 326 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PLEKHB1Q9UF11 243 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-205ENST00000477508 PROCRQ9UNN8 238 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 RASD1Q9Y272 281 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 B3GALT5Q9Y2C3 310 aa11.7□□□□□ -0.54
TOP3A-205ENST00000477508 MAST4O15021 2626 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 A1L4Q6 167 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 A8MXE2 369 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 GSC2O15499 205 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CLDN1O95832 211 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 THY1P04216 161 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 SMIM11AP58511 58 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CDSNQ15517 529 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CYP2R1Q6VVX0 501 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 BTLAQ7Z6A9 289 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 GALNT5Q7Z7M9 940 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 RNF113BQ8IZP6 322 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms