RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TYW3Q6IPR3 259 aaKnown RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 KRT80Q6KB66 452 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 NIPAL3Q6P499 406 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 EMBQ6PCB8 327 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 UGT2A3Q6UWM9 527 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ZCCHC23Q6ZST2 131 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ANKRD46Q86W74 232 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ADGRG3Q86Y34 549 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 IFT20Q8IY31 132 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 GSPT2Q8IYD1 628 aaKnown RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 CADM2Q8N3J6 435 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 TMEM99Q8N816 258 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 OR1K1Q8NGR3 316 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 UBASH3BQ8TF42 649 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF418Q8TF45 676 aaPredicted RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 MZB1Q8WU39 189 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 UBLCP1Q8WVY7 318 aaPredicted RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 CKAP2Q8WWK9 683 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 PMM1Q92871 262 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 HPS1Q92902 700 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ROPN1LQ96C74 230 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 TUBGCP3Q96CW5 907 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ANKRD27Q96NW4 1050 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF385AQ96PM9 386 aaKnown RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 KATNB1Q9BVA0 655 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 GATA5Q9BWX5 397 aaPredicted RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 TAPBPLQ9BX59 468 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF350Q9GZX5 532 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 PLK3Q9H4B4 646 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 SERHL2Q9H4I8 314 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 SEC61A2Q9H9S3 476 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 TRAPPC4Q9Y296 219 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 GRIP1Q9Y3R0 1128 aa5.8□□□□□ -1.48
RTFDC1-206ENST00000477485 B4DSR2 109 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 TRIM77I1YAP6 450 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 DNAJA2O60884 412 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 LILRA1O75019 489 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 SEC14L2O76054 403 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PDE5AO76074 875 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 TACSTD2P09758 323 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 G6PDP11413 515 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 IL7RP16871 459 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 KRT4P19013 534 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 TCN1P20061 433 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 GPR6P46095 362 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 DVL1P1P54792 670 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 KCNJ10P78508 379 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 ROR2Q01974 943 aaKnown RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 BNIP2Q12982 314 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 DAG1Q14118 895 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 EFNB3Q15768 340 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF311Q5JNZ3 666 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 C6orf136Q5SQH8 315 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PRAMEF8Q5VWM4 474 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PRAMEF7Q5VXH5 474 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 FAHD2BQ6P2I3 314 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 ANKRD16Q6P6B7 361 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PAQR6Q6TCH4 344 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 FRRS1Q6ZNA5 592 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 CDK20Q8IZL9 346 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 OR4F15Q8NGB8 312 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 SGMS2Q8NHU3 365 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PSMA8Q8TAA3 256 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 EPS8L3Q8TE67 593 aaKnown RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 CNOT9Q92600 299 aaKnown RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 TMEM45BQ96B21 275 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 COQ8BQ96D53 544 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 FAHD2AQ96GK7 314 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 C3orf30Q96M34 536 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 RHOXF2Q9BQY4 288 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 MECRQ9BV79 373 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 DPY30Q9C005 99 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 SAP130Q9H0E3 1048 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 CRLF2Q9HC73 371 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 OBP2BQ9NPH6 170 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 HIF1ANQ9NWT6 349 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 MARCOQ9UEW3 520 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 OSGIN1Q9UJX0 560 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 FBXO9Q9UK97 447 aaPredicted RBP5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 PCDHB10Q9UN67 800 aa5.79□□□□□ -1.48
RTFDC1-206ENST00000477485 A0A0A6YYJ9 748 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 TLDC2A0PJX2 215 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 CFAP73A6NFT4 308 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 AQP7P3A6NL99 342 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SLCO1B7G3V0H7 640 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 M0R233 179 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF208O43345 1280 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 PPIHO43447 177 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 NPHS1O60500 1241 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 UPK3AO75631 287 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SHBGP04278 402 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 CHRM4P08173 479 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SAGP10523 405 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 EGR1P18146 543 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 NCF2P19878 526 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 EPHA1P21709 976 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 UQCRC2P22695 453 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 GIFP27352 417 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms