RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SERPINA11Q86U17 422 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 ZNF439Q8NDP4 499 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 SGPP1Q9BX95 441 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 OR6C65A6NJZ3 312 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 RNF212BA8MTL3 300 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 H3BMQ9 156 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 J3KTA2 159 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 ADAM12O43184 909 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 PENKP01210 267 aaPredicted RBP17.3■□□□□ 0.36
VARS2-209ENST00000477288 SNCAP37840 140 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 RPL11P62913 178 aaKnown RBP17.3■□□□□ 0.36
VARS2-209ENST00000477288 SYPL1Q16563 259 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 SLC6A19Q695T7 634 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 ZNF595Q8IYB9 648 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 OR5K2Q8NHB8 316 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 DUSP19Q8WTR2 217 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 ZNF566Q969W8 418 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 VAPAQ9P0L0 249 aa17.3■□□□□ 0.36
VARS2-209ENST00000477288 WASH4PA8MWX3 477 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 H7C1C5 153 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 HOXD9P28356 352 aaPredicted RBP17.29■□□□□ 0.36
VARS2-209ENST00000477288 TAS2R19P59542 299 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 LCN6P62502 163 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 CLDN10P78369 228 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 C9orf152Q5JTZ5 239 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 OR4A16Q8NH70 328 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 NTMT1Q9BV86 223 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 MSTNO14793 375 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 TXNL1O43396 289 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 OIP5O43482 229 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 CSNK1DP48730 415 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 THBS3P49746 956 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 P2RX1P51575 399 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 BAXQ07812 192 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 CTSL3PQ5NE16 218 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 BPIFB2Q8N4F0 458 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 OR4F15Q8NGB8 312 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 TMEM163Q8TC26 289 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 DCAF13Q9NV06 445 aaKnown RBP17.29■□□□□ 0.36
VARS2-209ENST00000477288 ZNF264O43296 627 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 NXPH3O95157 252 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 AOAHP28039 575 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 MTCP1P56278 107 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 NOXA1Q86UR1 476 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 OR7G1Q8NGA0 311 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 WWTR1Q9GZV5 400 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 B3GNT9Q6UX72 402 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 ZBED3Q96IU2 234 aaPredicted RBP17.29■□□□□ 0.36
VARS2-209ENST00000477288 OCSTAMPQ9BR26 566 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 PUS1Q9Y606 427 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS2-209ENST00000477288 AHDC1Q5TGY3 1603 aaPredicted RBP17.29■□□□□ 0.36
VARS2-209ENST00000477288 YPEL5P62699 121 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 KCNJ10P78508 379 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 ARNT2Q9HBZ2 717 aa17.29■□□□□ 0.36
VARS2-209ENST00000477288 SCAF4O95104 1147 aaKnown RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 HES1Q14469 280 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 MLF2Q15773 248 aaPredicted RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 MRPL2Q5T653 305 aaKnown RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 APOOLQ6UXV4 268 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 ZNF836Q6ZNA1 936 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 NKX3-1Q99801 234 aaPredicted RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 TMEM59Q9BXS4 323 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 ARPC4-TTLL3A0A0A6YYG9 625 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 H7C1Q1 480 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 TOR1AO14656 332 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 SCGB1D1O95968 90 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 CATR1Q13166 79 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 PGGHGQ32M88 737 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 ZC3HAV1LQ96H79 300 aaKnown RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 TCEAL2Q9H3H9 227 aaPredicted RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 ERVFC1P60507 584 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 MRPS10P82664 201 aaKnown RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 SIX1Q15475 284 aaPredicted RBP17.28■□□□□ 0.36
VARS2-209ENST00000477288 RNLSQ5VYX0 342 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 FAM174AQ8TBP5 190 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 UHRF2Q96PU4 802 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 TM7SF3Q9NS93 570 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 UBE2NLQ5JXB2 153 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 PRICKLE2Q7Z3G6 844 aa17.28■□□□□ 0.36
VARS2-209ENST00000477288 MCRIP1C9JLW8 97 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 LCMT2O60294 686 aaKnown RBP17.27■□□□□ 0.36
VARS2-209ENST00000477288 GM2AP17900 193 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 RGRP47804 291 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 KHDC1LQ5JSQ8 128 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 SLC43A2Q8N370 569 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 LIPHQ8WWY8 451 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 DUSP13Q9UII6 198 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 C17orf112F2Z3M2 114 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 ZNF593O00488 134 aaPredicted RBP17.27■□□□□ 0.36
VARS2-209ENST00000477288 GSTP1P09211 210 aaKnown RBP17.27■□□□□ 0.36
VARS2-209ENST00000477288 PRDX1Q06830 199 aaKnown RBP17.27■□□□□ 0.36
VARS2-209ENST00000477288 FCRLAQ7L513 359 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 OR13C2Q8NGS9 318 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 SECTM1Q8WVN6 248 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 ZNF75AQ96N20 296 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 ENPP5Q9UJA9 477 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 POM121CA8CG34 1229 aa17.27■□□□□ 0.36
VARS2-209ENST00000477288 DDAH2O95865 285 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms