RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 P2RX6O15547 441 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 XRCC2O43543 280 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PSTPIP1O43586 416 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CYTH3O43739 400 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 AIREO43918 545 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 GMDSO60547 372 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RAMP3O60896 148 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CNOT3O75175 753 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 NDUFS7O75251 213 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 FCN3O75636 299 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 LTN1O94822 1766 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ERLIN2O94905 339 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 FGF19O95750 216 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ASS1P00966 412 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 HLA-HP01893 362 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 P04436 131 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TFAP2AP05549 437 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 HBQ1P09105 142 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 OCM2P0CE71 109 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC35E2BP0CK96 405 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC35E2P0CK97 266 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 EGR2P11161 476 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 BCKDHAP12694 445 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CCL5P13501 91 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CHRNB2P17787 502 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SONP18583 2426 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 CNR1P21554 472 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 BCKDHBP21953 392 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RPL4P36578 427 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 GMPRP36959 345 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CFHR2P36980 270 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RPL3P39023 403 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC1A1P43005 524 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CBX5P45973 191 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 GPR1P46091 355 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PGFP49763 221 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CTSWP56202 376 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 OR2B6P58173 313 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MRPS25P82663 173 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 TFF2Q03403 129 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 KLRB1Q12918 225 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TAF10Q12962 218 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 LY6DQ14210 128 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC17A1Q14916 467 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PPP1R3AQ16821 1122 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 FAM74A3Q4VXF1 159 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MIDNQ504T8 468 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PHLDA2Q53GA4 152 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CYBRD1Q53TN4 286 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 AWAT1Q58HT5 328 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RNLSQ5VYX0 342 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TRNP1Q6NT89 227 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CLEC18BQ6UXF7 455 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 LRRC31Q6UY01 552 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ASCL4Q6XD76 172 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CERS6Q6ZMG9 384 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 LANCL3Q6ZV70 420 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 APTXQ7Z2E3 356 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 ZNF554Q86TJ5 538 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RNF130Q86XS8 419 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CACUL1Q86Y37 369 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ARHGEF19Q8IW93 802 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC35F2Q8IXU6 374 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 METTL4Q8N3J2 472 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TTC29Q8NA56 475 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 CYB561A3Q8NBI2 242 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CLEC18CQ8NCF0 446 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CARMIL3Q8ND23 1372 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SDR9C7Q8NEX9 313 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 B3GNT7Q8NFL0 401 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TTLQ8NG68 377 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 OR7A2PQ8NGA2 310 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 LGALS14Q8TCE9 139 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SHROOM3Q8TF72 1996 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CA5BP1Q8WTZ4 195 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TMEM255BQ8WV15 326 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PIK3R3Q92569 461 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RAD50Q92878 1312 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CPNE4Q96A23 557 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 S100PBPQ96BU1 408 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 CXorf40BQ96DE9 158 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 NXPE2Q96DL1 559 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SDSLQ96GA7 329 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TIMD4Q96H15 378 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PCED1BQ96HM7 432 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RNF170Q96K19 258 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 C12orf42Q96LP6 360 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 Q96MF0 132 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MCCC1Q96RQ3 725 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 CLCC1Q96S66 551 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MACROD1Q9BQ69 325 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 WDR77Q9BQA1 342 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 DCUN1D5Q9BTE7 237 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MAP1LC3CQ9BXW4 147 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RACGAP1Q9H0H5 632 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 UPF3AQ9H1J1 476 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 SLC25A51Q9H1U9 297 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 HIPK2Q9H2X6 1198 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ALG9Q9H6U8 611 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ATP13A3Q9H7F0 1226 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms