RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-219ENST00000476625 NOX3Q9HBY0 568 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 RLIMQ9NVW2 624 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 ADPRHL2Q9NX46 363 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 SLC35A3Q9Y2D2 325 aa10.36□□□□□ -0.75
HDAC6-219ENST00000476625 LIPT2A6NK58 231 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 B9A039 149 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 ANKRD28O15084 1053 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 NPHS1O60500 1241 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 WNT11O96014 354 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 CRYAAP02489 173 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 TCN1P20061 433 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-219ENST00000476625 PRPS1L1P21108 318 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 GIFP27352 417 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 POLR2HP52434 150 aaKnown RBP10.35□□□□□ -0.75
HDAC6-219ENST00000476625 CHN2P52757 468 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 NME5P56597 212 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 EFNB3Q15768 340 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 ADRM1Q16186 407 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 PDCD2Q16342 344 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-219ENST00000476625 SAXO2Q658L1 398 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 KRT80Q6KB66 452 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 EPHX4Q8IUS5 362 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 PNPT1Q8TCS8 783 aaKnown RBP10.35□□□□□ -0.75
HDAC6-219ENST00000476625 DDIT4LQ96D03 193 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 DOK1Q99704 481 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 KCNS3Q9BQ31 491 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 NAA11Q9BSU3 229 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-219ENST00000476625 KATNB1Q9BVA0 655 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 SAP130Q9H0E3 1048 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 SLC38A1Q9H2H9 487 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 EXD2Q9NVH0 621 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 TRAPPC4Q9Y296 219 aa10.35□□□□□ -0.75
HDAC6-219ENST00000476625 AQP7P3A6NL99 342 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 DUXAA6NLW8 204 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 HMGN4O00479 90 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 DNPH1O43598 174 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 ITM2AO43736 263 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 KRT33AO76009 404 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 AK1P00568 194 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 IGLV1-44P01699 117 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 ADRA2AP08913 450 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PRG2P13727 222 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 IFNGR1P15260 489 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 COL8A2P25067 703 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 CDKN2CP42773 168 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 CLDN8P56748 225 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 UBE2NP61088 152 aaKnown RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 ACTG1P63261 375 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 IL1RL1Q01638 556 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 TGFBR3Q03167 851 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 EPS8Q12929 822 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 NPRL3Q12980 569 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 RIN1Q13671 783 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 MAPK11Q15759 364 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 SPANXN4Q5MJ08 99 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 COX20Q5RI15 118 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PHYHD1Q5SRE7 291 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 MRPL2Q5T653 305 aaKnown RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PAQR6Q6TCH4 344 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 CREB3L2Q70SY1 520 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 RNF130Q86XS8 419 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 VRK2Q86Y07 508 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 WDFY1Q8IWB7 410 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 CLDND2Q8NHS1 167 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 KIF18AQ8NI77 898 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 MIPOL1Q8TD10 442 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 APOPT1Q96IL0 206 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PKNOX2Q96KN3 472 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 SLC35A5Q9BS91 424 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 TMEM45AQ9NWC5 275 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PARPBPQ9NWS1 579 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 MYEF2Q9P2K5 600 aaKnown RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-219ENST00000476625 FZR1Q9UM11 496 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 PCDHGB4Q9UN71 923 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 MEGF8Q7Z7M0 2845 aa10.34□□□□□ -0.75
HDAC6-219ENST00000476625 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 TLDC2A0PJX2 215 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 OR6C65A6NJZ3 312 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF587BE7ETH6 402 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF208O43345 1280 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 FRS3O43559 492 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 AVPP01185 164 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 HPXP02790 462 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 GSNP06396 782 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 NPR2P20594 1047 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 KHKP50053 298 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 SEC24CP53992 1094 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ARF1P84077 181 aaKnown RBP10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ROR2Q01974 943 aaKnown RBP10.33□□□□□ -0.76
HDAC6-219ENST00000476625 HNRNPA0Q13151 305 aaKnown RBP10.33□□□□□ -0.76
HDAC6-219ENST00000476625 SNTB2Q13425 540 aaKnown RBP10.33□□□□□ -0.76
HDAC6-219ENST00000476625 MAD2L1BPQ15013 274 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ELFN2Q5R3F8 820 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ATAD3BQ5T9A4 648 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF836Q6ZNA1 936 aa10.33□□□□□ -0.76
HDAC6-219ENST00000476625 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms