RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 MAGED1Q9Y5V3 778 aaPredicted RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 GMEB1Q9Y692 573 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 FN1P02751 2386 aaKnown RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 CADP27708 2225 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 RAI1Q7Z5J4 1906 aaPredicted RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 AQP7P3A6NL99 342 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 SMAD7O15105 426 aaKnown RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 AKR7A3O95154 331 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 VAMP5O95183 116 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 ETS2P15036 469 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 NCF2P19878 526 aaPredicted RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 PTAFRP25105 342 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 P2RY4P51582 365 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 PAGE3Q5JUK9 113 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 C1orf140Q5VVS0 124 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 CASP12Q6UXS9 341 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 WDR31Q8NA23 367 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 OR9K2Q8NGE7 335 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 OR52N5Q8NH56 324 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 BBS10Q8TAM1 723 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 SPDL1Q96EA4 605 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 ZNF385AQ96PM9 386 aaKnown RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 TRAF4Q9BUZ4 470 aaPredicted RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 AMBRA1Q9C0C7 1298 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 GRIP2Q9C0E4 1043 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 CACYBPQ9HB71 228 aaKnown RBP9.49□□□□□ -0.89
SEC13-214ENST00000476597 CCDC167Q9P0B6 97 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 UPB1Q9UBR1 384 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 MGAT4BQ9UQ53 548 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 DSCAMO60469 2012 aa9.49□□□□□ -0.89
SEC13-214ENST00000476597 HIVEP2P31629 2446 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 A0A1W2PP18 115 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 A0A1W2PR80 420 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 C5orf58C9J3I9 102 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 FTCDNL1E5RQL4 147 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 ABCD4O14678 606 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 FRS3O43559 492 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 ARAFP10398 606 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 CD40P25942 277 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 MPGP29372 298 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 PRKAR1BP31321 381 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 CDKN1AP38936 164 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 ATP4BP51164 291 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
SEC13-214ENST00000476597 HOXC5Q00444 222 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 AGKQ53H12 422 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 TMEM225Q6GV28 225 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 KLHL17Q6TDP4 642 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 AAED1Q7RTV5 226 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 DTX2Q86UW9 622 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 C10orf111Q8N326 155 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 C17orf78Q8N4C9 275 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 POMGNT2Q8NAT1 580 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 C1orf162Q8NEQ5 155 aaPredicted RBP9.48□□□□□ -0.89
SEC13-214ENST00000476597 MFSD8Q8NHS3 518 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
SEC13-214ENST00000476597 BOD1Q96IK1 185 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 SLC17A5Q9NRA2 495 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 VAPAQ9P0L0 249 aa9.48□□□□□ -0.89
SEC13-214ENST00000476597 HMGB1P1B2RPK0 211 aaPredicted RBP9.47□□□□□ -0.89
SEC13-214ENST00000476597 E7EQL1 145 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 NR5A2O00482 541 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 GPX2P18283 190 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 PPIBP23284 216 aaKnown RBP9.47□□□□□ -0.89
SEC13-214ENST00000476597 ZNF83P51522 516 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 CDH11P55287 796 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 CDK6Q00534 326 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 TGFBR3Q03167 851 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 EGR4Q05215 589 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 TNK1Q13470 666 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 ETFDHQ16134 617 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 CLEC12BQ2HXU8 276 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 GCNT6Q5T4J0 391 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 C1QTNF12Q5T7M4 302 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 C9orf135Q5VTT2 229 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 REEP3Q6NUK4 255 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 DHRS4L2Q6PKH6 230 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 DLEU7Q6UYE1 221 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 CREB3L2Q70SY1 520 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 GPAT4Q86UL3 456 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 EPHX4Q8IUS5 362 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 PIAS4Q8N2W9 510 aaPredicted RBP9.47□□□□□ -0.89
SEC13-214ENST00000476597 LSMEM1Q8N8F7 131 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 NFKBIDQ8NI38 313 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 DYDC1Q8WWB3 177 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 CKAP2Q8WWK9 683 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 STON2Q8WXE9 905 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 DHRS9Q9BPW9 319 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 PTDSS2Q9BVG9 487 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 C1QTNF6Q9BXI9 259 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 SLCO5A1Q9H2Y9 848 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 IKZF5Q9H5V7 419 aa9.47□□□□□ -0.89
SEC13-214ENST00000476597 TMEM38AQ9H6F2 299 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms