RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PLXDC1Q8IUK5 500 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 SLC35F3Q8IY50 421 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 SLC43A2Q8N370 569 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 NPEPL1Q8NDH3 523 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PELI1Q96FA3 418 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PGLYRP3Q96LB9 341 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 DMRTB1Q96MA1 342 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 TSSK2Q96PF2 358 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 NUDT9Q9BW91 350 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PPP1R3EQ9H7J1 279 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ENAMQ9NRM1 1142 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF221Q9UK13 617 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 MKL2Q9ULH7 1088 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 MMACHCQ9Y4U1 282 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 TRBV2A0A0J9YWF9 115 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 H7C1C5 153 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 DDAH2O95865 285 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PAHP00439 452 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 OR2T7P0C7T2 308 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 TACR3P29371 465 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 CSF2RBP32927 897 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 DIO1P49895 249 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 EPHA4P54764 986 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 CTXN1P60606 82 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 PRPS1P60891 318 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 LCN6P62502 163 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ACTA2P62736 377 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ACTG2P63267 376 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 CFHR1Q03591 330 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 TRAM1Q15629 374 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 SMAD2Q15796 467 aaKnown RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 SLC25A35Q3KQZ1 300 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ALG10Q5BKT4 473 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 DMKNQ6E0U4 476 aaPredicted RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 MARCH3Q86UD3 253 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 POMGNT2Q8NAT1 580 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 LSM14AQ8ND56 463 aaKnown RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 OR2T27Q8NH04 317 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 THAP4Q8WY91 577 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF524Q96C55 264 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 WACQ9BTA9 647 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 NRIP3Q9NQ35 241 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 ST6GALNAC2Q9UJ37 374 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 MRTO4Q9UKD2 239 aaKnown RBP8.16□□□□□ -1.1
CCDC66-216ENST00000476142 COPS3Q9UNS2 423 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 NOX1Q9Y5S8 564 aa8.16□□□□□ -1.1
CCDC66-216ENST00000476142 THADAQ6YHU6 1953 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 FRG2CA6NGY1 282 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 BCAT2O15382 392 aaPredicted RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 EIF4EP06730 217 aaKnown RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 PRKAR1AP10644 381 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 GALNSP34059 522 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 KIR2DL3P43628 341 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 MAP2K3P46734 347 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 RPS5P46782 204 aaKnown RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 EFNA3P52797 238 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 PLCXD2Q0VAA5 305 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ELAVL1Q15717 326 aaKnown RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF74Q16587 644 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ATAD3CQ5T2N8 411 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 NCCRP1Q6ZVX7 275 aaPredicted RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 SLITRK4Q8IW52 837 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF511Q8NB15 262 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 OR4M1Q8NGD0 313 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 TRMT10AQ8TBZ6 339 aaKnown RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 ZNF721Q8TF20 911 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 CAPSLQ8WWF8 208 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 KTI12Q96EK9 354 aaPredicted RBP8.15□□□□□ -1.1
CCDC66-216ENST00000476142 OR1F2PQ96R84 312 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 PDCD1LG2Q9BQ51 273 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 RTN4RQ9BZR6 473 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 NCDNQ9UBB6 729 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 COPS7AQ9UBW8 275 aa8.15□□□□□ -1.1
CCDC66-216ENST00000476142 A0A0B4J203 849 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 IDSB3KWA1 339 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 B4DXG7 233 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 SCO2O43819 266 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 HIST1H2ABP04908 130 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 GAAP10253 952 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 MST1P26927 711 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 CDKN2AP42771 156 aaKnown RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 AFF3P51826 1226 aaKnown RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 SIRPAP78324 504 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 ZNF117Q03924 483 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 BIKQ13323 160 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 TBRG1Q3YBR2 411 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 RNASE12Q5GAN4 147 aaKnown RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 FNDC7Q5VTL7 733 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 PTCRAQ6ISU1 281 aaPredicted RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.11
CCDC66-216ENST00000476142 METAP1DQ6UB28 335 aaPredicted RBP8.15□□□□□ -1.11
CCDC66-216ENST00000476142 PLET1Q6UQ28 207 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms