RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, human

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPUSD3-215	ENST00000475470	GPX7	Q96SL4	187 aa	Predicted RBP	13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TIMP4	Q99727	224 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	COQ7	Q99807	217 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	HDHD5	Q9BXW7	423 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SMURF1	Q9HCE7	757 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TRIM36	Q9NQ86	728 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	DAPK2	Q9UIK4	370 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TRBV11-1	A0A0K0K1C0	115 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	RGS5	O15539	181 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CPNE3	O75131	537 aa	Known RBP	13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SERPINI2	O75830	405 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MT-ND5	P03915	603 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ASAH2B	P0C7U1	165 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SDC2	P34741	201 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	RPS5	P46782	204 aa	Known RBP	13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	LTB	Q06643	244 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ALG10	Q5BKT4	473 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	LCN1P1	Q5VSP4	162 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	PARP16	Q8N5Y8	322 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NPEPL1	Q8NDH3	523 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NUBPL	Q8TB37	319 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	DUSP19	Q8WTR2	217 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ATOH1	Q92858	354 aa	Predicted RBP	13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SPSB2	Q99619	263 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ASB6	Q9NWX5	421 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	QPCTL	Q9NXS2	382 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	PPIE	Q9UNP9	301 aa	Known RBP	13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MPDZ	O75970	2070 aa		13.99	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TEX13C	A0A0J9YWL9	993 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470		A0A1W2PQL4	384 aa	Predicted RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NTN3	O00634	580 aa	Predicted RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GDF9	O60383	454 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SLC25A12	O75746	678 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CTXN1	P60606	82 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ZNF85	Q03923	595 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GPR50	Q13585	617 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TRIM16L	Q309B1	348 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NUP54	Q7Z3B4	507 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NANOGNB	Q7Z5D8	188 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GPALPP1	Q8IXQ4	340 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	AGBL5	Q8NDL9	886 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TAAR8	Q969N4	342 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	WDR77	Q9BQA1	342 aa	Predicted RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MED18	Q9BUE0	208 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SLC26A1	Q9H2B4	701 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SMOC1	Q9H4F8	434 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SLC6A5	Q9Y345	797 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CD14	P08571	375 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CLEC2L	P0C7M8	214 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	FBXW4	P57775	412 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SLC26A5	P58743	744 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	HNRNPA0	Q13151	305 aa	Known RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	QPRT	Q15274	297 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	JAZF1	Q86VZ6	243 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	POMGNT2	Q8NAT1	580 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SYT14	Q8NB59	555 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	OR5L2	Q8NGL0	311 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	C8orf44	Q96CB5	159 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470		Q96M85	177 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CNN2	Q99439	309 aa	Known RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	NDEL1	Q9GZM8	345 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TBCCD1	Q9NVR7	557 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ZNF229	Q9UJW7	825 aa		13.98	□□□□□ -0.17
RPUSD3-215	ENST00000475470	OR6C68	A6NDL8	312 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TMEM221	A6NGB7	291 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470		J3QLW9	94 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470		M0R296	226 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GABRP	O00591	440 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	RNF13	O43567	381 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	F13B	P05160	661 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ZNF19	P17023	458 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TGM4	P49221	684 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	LEG1	Q6P5S2	330 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MARCH9	Q86YJ5	346 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MISP	Q8IVT2	679 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ARIH2OS	Q8N7S6	290 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	LRRC75A	Q8NAA5	344 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TMCO6	Q96DC7	493 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	C4orf36	Q96KX1	117 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	FKRP	Q9H9S5	495 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ABCB10	Q9NRK6	738 aa		13.97	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TRAV36DV7	A0A075B6V5	113 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	UPK1B	O75841	260 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	APEH	P13798	732 aa	Known RBP	13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SPI1	P17947	270 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	UQCRC1	P31930	480 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	POLR2H	P52434	150 aa	Known RBP	13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	RPL18	Q07020	188 aa	Known RBP	13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GGTLC2	Q14390	218 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	SLC35D3	Q5M8T2	416 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	VASN	Q6EMK4	673 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	MRPL14	Q6P1L8	145 aa	Known RBP	13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	TMEM205	Q6UW68	189 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	CCDC190	Q86UF4	302 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	ZPLD1	Q8TCW7	415 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	GPR119	Q8TDV5	335 aa		13.96	□□□□□ -0.17
RPUSD3-215	ENST00000475470	DCLRE1C	Q96SD1	692 aa	Known RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms