RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ZFHX4Q86UP3 3567 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CACNA1BQ00975 2339 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 DSPP15924 2871 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 EPG5Q9HCE0 2579 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 A0A087WV62 115 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 PNMA8CA0A1B0GUJ8 204 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 C2orf92A0A1B0GVN3 265 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SNTNA6NMZ2 147 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LOC110117498-PIK3R3F6TDL0 507 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LRRTM2O43300 516 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FRS3O43559 492 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 PLOD3O60568 738 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 APOL3O95236 402 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 NTN1O95631 604 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 WDPCPO95876 746 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LGI1O95970 557 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CHRM4P08173 479 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 PIPP12273 146 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 PRKACAP17612 351 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ATF4P18848 351 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CYB561P49447 251 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TNFSF10P50591 281 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 NRG3P56975 720 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC37A1P57057 533 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 DEFA1P59665 94 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 DEFA3P59666 94 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 HOXC5Q00444 222 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MXD1Q05195 221 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF91Q05481 1191 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 DUSP2Q05923 314 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 COX10Q12887 443 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MADCAM1Q13477 382 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MLC1Q15049 377 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 STK11Q15831 433 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SNAPC1Q16533 368 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF628Q5EBL2 1059 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC6A19Q695T7 634 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 C12orf73Q69YU5 71 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 PRICKLE2Q7Z3G6 844 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LSRQ86X29 649 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 KRT73Q86Y46 540 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM26EQ8N5C1 309 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM156Q8N614 296 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SIMC1Q8NDZ2 872 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ANGPTL6Q8NI99 470 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 GRPEL2Q8TAA5 225 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ASB15Q8WXK1 588 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC9A6Q92581 669 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CTHRC1Q96CG8 243 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CNRIP1Q96F85 164 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LRR1Q96L50 414 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CEP19Q96LK0 163 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SDHCQ99643 169 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC30A2Q9BRI3 323 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 BARHL1Q9BZE3 327 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 WWTR1Q9GZV5 400 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 OR10A5Q9H207 317 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MMP28Q9H239 520 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 EQTNQ9NQ60 294 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MAN2C1Q9NTJ4 1040 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MYOTQ9UBF9 498 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 NUFIP1Q9UHK0 495 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF223Q9UK11 482 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC9A8Q9Y2E8 581 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 LSM2Q9Y333 95 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ASPMQ8IZT6 3477 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TNRC6AQ8NDV7 1962 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 A0A087WUU8 490 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 OR6C70A6NIJ9 312 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM25AB3EWG3 89 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM25CB3EWG5 89 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM25GB3EWG6 89 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 K7EM74 188 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TP53I11O14683 189 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FCMRO60667 390 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TSC22D2O75157 780 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ITGA10O75578 1167 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 C1QL1O75973 258 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 SOX30O94993 753 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CRYABP02511 175 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CLPSP04118 112 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 S1PR1P21453 382 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ENPP1P22413 925 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CD96P40200 585 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ETV1P50549 477 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 RORCP51449 518 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 EFNB1P98172 346 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 CDK5Q00535 292 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MGAT2Q10469 447 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 FUT5Q11128 374 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 EBPQ15125 230 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 OR1C1Q15619 314 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TAB1Q15750 504 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 OCLNQ16625 522 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZMAT1Q5H9K5 638 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF311Q5JNZ3 666 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM201Q5SNT2 666 aa3.81□□□□□ -1.8
GAPVD1-216ENST00000474637 MEDAGQ5VYS4 303 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms