RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 LRRC8CQ8TDW0 803 aa16.31■□□□□ 0.2
COL7A1-209ENST00000474432 TRAF4Q9BUZ4 470 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-209ENST00000474432 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
COL7A1-209ENST00000474432 VAPAQ9P0L0 249 aa16.31■□□□□ 0.2
COL7A1-209ENST00000474432 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
COL7A1-209ENST00000474432 ALPK2Q86TB3 2170 aa16.31■□□□□ 0.2
COL7A1-209ENST00000474432 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
COL7A1-209ENST00000474432 CR1P17927 2039 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 CIB4A0PJX0 185 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 A8MVM7 634 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 FTCDNL1E5RQL4 147 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 NDUFS7O75251 213 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 GPIP06744 558 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 CDKN1AP38936 164 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 AQP5P55064 265 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 EGR4Q05215 589 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 SPOCK1Q08629 439 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 TNK1Q13470 666 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 ZNF311Q5JNZ3 666 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 C9orf135Q5VTT2 229 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 DTX2Q86UW9 622 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 SPDL1Q96EA4 605 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 PTDSS2Q9BVG9 487 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 SF3B5Q9BWJ5 86 aaKnown RBP16.3■□□□□ 0.2
COL7A1-209ENST00000474432 GRIP2Q9C0E4 1043 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 PARPBPQ9NWS1 579 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 CCDC167Q9P0B6 97 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 IFT52Q9Y366 437 aa16.3■□□□□ 0.2
COL7A1-209ENST00000474432 A0A1W2PP18 115 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 E7EQL1 145 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 FZD7O75084 574 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 ARAFP10398 606 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 PTNP21246 168 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 ZNF83P51522 516 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 STX1BP61266 288 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 COPZ1P61923 177 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 KRTAP1-1Q07627 177 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 C1orf140Q5VVS0 124 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 B3GLCTQ6Y288 498 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 GOLGA6L1Q8N7Z2 621 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 BBS10Q8TAM1 723 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 SLC35B4Q969S0 331 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 PIF1Q9H611 641 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 DCTN4Q9UJW0 460 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 ABCA2Q9BZC7 2435 aa16.29■□□□□ 0.2
COL7A1-209ENST00000474432 HIVEP2P31629 2446 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 FAM171A2A8MVW0 826 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 NR5A2O00482 541 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 TPST1O60507 370 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 IGHV4-39P01824 125 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 ETS2P15036 469 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 CD40P25942 277 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 HTR2AP28223 471 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 ATP4BP51164 291 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 LGALS3BPQ08380 585 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 ADRM1Q16186 407 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 OR7E24Q6IFN5 339 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 C6orf89Q6UWU4 347 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 DLEU7Q6UYE1 221 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 EPHX4Q8IUS5 362 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 NFKBIDQ8NI38 313 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 STK35Q8TDR2 534 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 BOD1Q96IK1 185 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 C1QTNF6Q9BXI9 259 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 RAD21L1Q9H4I0 556 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 ZNF385DQ9H6B1 395 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 SLC17A5Q9NRA2 495 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 ADPRHL2Q9NX46 363 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 JMJD1CQ15652 2540 aa16.28■□□□□ 0.2
COL7A1-209ENST00000474432 TMEM247A6NEH6 219 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 GPX2P18283 190 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 NCF2P19878 526 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-209ENST00000474432 PTAFRP25105 342 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 PRKAR1BP31321 381 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 CDH11P55287 796 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 AGKQ53H12 422 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 C11orf71Q6IPW1 123 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 TMEM108Q6UXF1 575 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 CREB3L2Q70SY1 520 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 LINGO2Q7L985 606 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 AAED1Q7RTV5 226 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 C1orf162Q8NEQ5 155 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-209ENST00000474432 KTI12Q96EK9 354 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-209ENST00000474432 WFDC6Q9BQY6 131 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 SLCO5A1Q9H2Y9 848 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 TMEM45AQ9NWC5 275 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 UPB1Q9UBR1 384 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 SEC14L4Q9UDX3 406 aa16.27■□□□□ 0.2
COL7A1-209ENST00000474432 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-209ENST00000474432 IGKV1D-42A0A075B6H8 117 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 MPGP29372 298 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 ACVR1BP36896 505 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 SELENOPP49908 381 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 CDK6Q00534 326 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 CLEC12BQ2HXU8 276 aa16.26■□□□□ 0.19
COL7A1-209ENST00000474432 GCNT6Q5T4J0 391 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms