RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 OR2W5A6NFC9 320 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 PSMB10P40306 273 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 LUMP51884 338 aaPredicted RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 PRMT2P55345 433 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 NDUFAF6Q330K2 333 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 MANEAQ5SRI9 462 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 RPL22L1Q6P5R6 122 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF836Q6ZNA1 936 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 OR4C6Q8NH72 309 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 C2CD4CQ8TF44 421 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 TMEM239Q8WW34 195 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 MOAP1Q96BY2 351 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF75AQ96N20 296 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 PIGMQ9H3S5 423 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 FKRPQ9H9S5 495 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 GNG8Q9UK08 70 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 SIGLEC7Q9Y286 467 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 V9GY05 133 aa17.12■□□□□ 0.33
ECHDC1-214ENST00000474289 CENPVL1A0A0U1RR11 272 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 CXorf51AA0A1B0GTR3 108 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 TMEM218A2RU14 115 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 H0YC42 278 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 EMC8O43402 210 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SPP1P10451 314 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SELPP16109 830 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 KCNJ3P48549 501 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 AKR1C2P52895 323 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 ACTA2P62736 377 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 ACTG2P63267 376 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 AKR1C1Q04828 323 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 DPPA4Q7L190 304 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SYS1Q8N2H4 156 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 OR9A2Q8NGT5 310 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SFT2D1Q8WV19 159 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SAGE1Q9NXZ1 904 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 ATG4BQ9Y4P1 393 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 A0A1W2PR48 441 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SYNDIG1LA6NDD5 238 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 PPP1R3DO95685 299 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 CTSLP07711 333 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 HTR2AP28223 471 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 FAUP35544 74 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 NAA10P41227 235 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 POU4F2Q12837 409 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 UQCC3Q6UW78 93 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 OR2W3Q7Z3T1 314 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 CCDC36Q8IYA8 594 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 C12orf45Q8N5I9 185 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 TMIEQ8NEW7 156 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 OR51A7Q8NH64 312 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 WNT2BQ93097 391 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 MIB2Q96AX9 1013 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 SLC35A4Q96G79 324 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 DPEP2Q9H4A9 486 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 KLHL31Q9H511 634 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 TMEM185BQ9H7F4 350 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 EPHA6Q9UF33 1036 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 PCDHB10Q9UN67 800 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 OR10H1Q9Y4A9 318 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 THSD7BQ9C0I4 1608 aa17.11■□□□□ 0.33
ECHDC1-214ENST00000474289 OR6C68A6NDL8 312 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 GABRR2P28476 465 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 PPIAP62937 165 aaKnown RBP17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 JMJD6Q6NYC1 403 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 DNM1P46Q6ZS02 220 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 GAREM2Q75VX8 874 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 GLB1L2Q8IW92 636 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 OR51L1Q8NGJ5 315 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 OR14A16Q8NHC5 309 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 CXorf40AQ8TE69 158 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 GLYATL2Q8WU03 294 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 SNX33Q8WV41 574 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 IGSF21Q96ID5 467 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 MACROD1Q9BQ69 325 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 CHST6Q9GZX3 395 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 ZNF230Q9UIE0 474 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 EDARQ9UNE0 448 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 A0A0D9SG52 128 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 TRAPPC13A5PLN9 417 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 C4orf51C9J302 202 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 MNDAP41218 407 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 EPHB3P54753 998 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 SLC9A5Q14940 896 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 C4orf46Q504U0 113 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 RPL13AP3Q6NVV1 102 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 OR6N1Q8NGY5 312 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 BPIFA2Q96DR5 249 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 FAM117AQ9C073 453 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 OR52A5Q9H2C5 316 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 WSB2Q9NYS7 404 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 INSL5Q9Y5Q6 135 aa17.1■□□□□ 0.33
ECHDC1-214ENST00000474289 LRIT2A6NDA9 550 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 CTNSO60931 367 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 EIF3GO75821 320 aaKnown RBP eCLIP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 GKN3PP0CG01 181 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms