RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MBD3L4A6NDZ8 208 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 MBD3L3A6NE82 208 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 MBD3L5A6NJ08 208 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 ENO4A6NNW6 628 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CLOCKO15516 846 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 PTP4A3O75365 173 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CIB2O75838 187 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 TPOP07202 933 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 GLI4P10075 376 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 ITGA2P17301 1181 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 FPR1P21462 350 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 FKBP2P26885 142 aaKnown RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 ACVR2AP27037 513 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CEACAM8P31997 349 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 RPS5P46782 204 aaKnown RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 EIF1AXP47813 144 aaKnown RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 CARD18P57730 90 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 RPS4XP62701 263 aaKnown RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 ADORA2A-AS1P86434 159 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 FOXF2Q12947 444 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 FOXD4Q12950 439 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 PON3Q15166 354 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 FAM69AQ5T7M9 428 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 WLSQ5T9L3 541 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 HBMQ6B0K9 141 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 ZNF585AQ6P3V2 769 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 PGBD2Q6P3X8 592 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CLEC18BQ6UXF7 455 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 EPHX4Q8IUS5 362 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CCDC103Q8IW40 242 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 TMEM99Q8N816 258 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 ZIC4Q8N9L1 334 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 LRRC75AQ8NAA5 344 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CLEC18CQ8NCF0 446 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 OR4K5Q8NGD3 323 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 MBD3L2Q8NHZ7 208 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 RNF128Q8TEB7 428 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 ROBO4Q8WZ75 1007 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 DTNBP1Q96EV8 351 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 RAB3IPQ96QF0 476 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 TTYH2Q9BSA4 534 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 ENKD1Q9H0I2 346 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 EXO5Q9H790 373 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 RNF122Q9H9V4 155 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 S100A14Q9HCY8 104 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 SERINC1Q9NRX5 453 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 TAS2R5Q9NYW4 299 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 RPS6KB2Q9UBS0 482 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 DNAJB9Q9UBS3 223 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 OSGIN2Q9Y236 505 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 MEMO1Q9Y316 297 aa9.25□□□□□ -0.93
CASC3-204ENST00000474190 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
CASC3-204ENST00000474190 AQP7P3A6NL99 342 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 H0Y3Z8 333 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 MS4A18H0YCH9 400 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 M0R082 166 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 KPNA4O00629 521 aaPredicted RBP9.24□□□□□ -0.93
CASC3-204ENST00000474190 WDR1O75083 606 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 TNFSF13O75888 250 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 OR7A10O76100 309 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 AKR7A3O95154 331 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 GADD45GO95257 159 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 CH25HO95992 272 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 CST1P01037 141 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 TFPIP10646 304 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 HLA-DOBP13765 273 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ABOP16442 354 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 CBLP22681 906 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 GRPRP30550 384 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 UQCRC1P31930 480 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 IDUAP35475 653 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 GSSP48637 474 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 NUP107P57740 925 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 SPIBQ01892 262 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 SLC17A1Q14916 467 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 OR7A5Q15622 319 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 MS4A18Q3C1V0 323 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 PAQR6Q6TCH4 344 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 TMPRSS11FQ6ZWK6 438 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 AMIGO2Q86SJ2 522 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ZGRF1Q86YA3 2104 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 LIX1LQ8IVB5 337 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 PM20D2Q8IYS1 436 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
CASC3-204ENST00000474190 MEIOBQ8N635 442 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 OR9Q2Q8NGE9 314 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ZNF417Q8TAU3 575 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ABHD3Q8WU67 409 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 WNT2BQ93097 391 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 RSRC1Q96IZ7 334 aaKnown RBP9.24□□□□□ -0.93
CASC3-204ENST00000474190 HS6ST2Q96MM7 605 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ALPK1Q96QP1 1244 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 ZNF587Q96SQ5 575 aaPredicted RBP9.24□□□□□ -0.93
CASC3-204ENST00000474190 EPYCQ99645 322 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 PSD2Q9BQI7 771 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 MCCC2Q9HCC0 563 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 FANCFQ9NPI8 374 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms