RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 Q96M85 177 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 NMNAT3Q96T66 252 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 TEAD3Q99594 435 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 C12orf10Q9HB07 376 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 TNFRSF10DQ9UBN6 386 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 HIF3AQ9Y2N7 669 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 TEX13CA0A0J9YWL9 993 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 MT-CO3P00414 261 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 IGHA1P01876 353 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 BGLAPP02818 100 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 TCEA1P23193 301 aaKnown RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 UQCRC1P31930 480 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 OTX2P32243 289 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 ENTPD1P49961 510 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 POLR2HP52434 150 aaKnown RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 RPL18Q07020 188 aaKnown RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 NUP54Q7Z3B4 507 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 ZNF485Q8NCK3 441 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 SLC22A8Q8TCC7 542 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 LIPHQ8WWY8 451 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 SPACA9Q96E40 222 aaPredicted RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 ZHX1-C8orf76Q96EF9 292 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 ERVK13-1Q9NX77 482 aa16.33■□□□□ 0.2
VARS2-206ENST00000473916 YARS2Q9Y2Z4 477 aaKnown RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 EXOSC1Q9Y3B2 195 aaKnown RBP16.33■□□□□ 0.2
VARS2-206ENST00000473916 TMEM129A0AVI4 362 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 IRGMA1A4Y4 181 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 PLD2O14939 933 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 ENDOUP21128 410 aaKnown RBP16.32■□□□□ 0.2
VARS2-206ENST00000473916 C17orf67Q0P5P2 114 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 NTRK2Q16620 822 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 PPP1R32Q7Z5V6 425 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 PHC2Q8IXK0 858 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 TTC9Q92623 222 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 SLC25A36Q96CQ1 311 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 LIN37Q96GY3 246 aaPredicted RBP16.32■□□□□ 0.2
VARS2-206ENST00000473916 TIMP4Q99727 224 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 SPRY4Q9C004 299 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 RACGAP1Q9H0H5 632 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 DCSTAMPQ9H295 470 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 METTL7AQ9H8H3 244 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 TIMMDC1Q9NPL8 285 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 TCFL5Q9UL49 500 aa16.32■□□□□ 0.2
VARS2-206ENST00000473916 SPIN1Q9Y657 262 aaPredicted RBP16.32■□□□□ 0.2
VARS2-206ENST00000473916 OR6C68A6NDL8 312 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 ANKUB1A6NFN9 424 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 C12orf71A8MTZ7 269 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 CLPXO76031 633 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 IGF2P01344 180 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NAGAP17050 411 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 PRKCAP17252 672 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 E2F1Q01094 437 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 MLLT11Q13015 90 aaPredicted RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 C1DQ13901 141 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 HES3Q5TGS1 186 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 GRINAQ7Z429 371 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 MARCH9Q86YJ5 346 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 MISPQ8IVT2 679 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NPEPL1Q8NDH3 523 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 ZMYND19Q96E35 227 aaPredicted RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 GPX7Q96SL4 187 aaPredicted RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 ISG20L2Q9H9L3 353 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 ADGRL4Q9HBW9 690 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 CHCHD3Q9NX63 227 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 DOCK10Q96BY6 2186 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 TRAV36DV7A0A075B6V5 113 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NSG1A0A0A6YYJ2 146 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NPIPB7O75200 414 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 IFNGP01579 166 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 IL11P20809 199 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 PAICSP22234 425 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 TMED10P49755 219 aaKnown RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 CTXN1P60606 82 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 PRPS1P60891 318 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 FOXK1P85037 733 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 FOXF1Q12946 379 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 ALG10Q5BKT4 473 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 LYPD4Q6UWN0 246 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 IL20RBQ6UXL0 311 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 FAM122BQ7Z309 247 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NANOGNBQ7Z5D8 188 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 SLC43A2Q8N370 569 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 RFLNBQ8N5W9 214 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 TMEM203Q969S6 136 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 DDOQ99489 341 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 DDA1Q9BW61 102 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 NDUFB11Q9NX14 153 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 PPP4R1LQ9P1A2 415 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 WIF1Q9Y5W5 379 aa16.31■□□□□ 0.2
VARS2-206ENST00000473916 CHCHD2Q9Y6H1 151 aaPredicted RBP16.31■□□□□ 0.2
VARS2-206ENST00000473916 SLC25A12O75746 678 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 F8A1P23610 371 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 CASP3P42574 277 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 CDKN2AP42771 156 aaKnown RBP16.3■□□□□ 0.2
VARS2-206ENST00000473916 HCCSP53701 268 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 EXT1Q16394 746 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 LSM14AQ8ND56 463 aaKnown RBP16.3■□□□□ 0.2
VARS2-206ENST00000473916 OR10H4Q8NGA5 316 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms