RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ATG4DQ86TL0 474 aaPredicted RBP17.17■□□□□ 0.34
COMMD1-208ENST00000472729 LRRC75A-AS1Q8N1F1 130 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 DEPDC4Q8N2C3 294 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 DPP10Q8N608 796 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 ZNF433Q8N7K0 673 aaPredicted RBP17.17■□□□□ 0.34
COMMD1-208ENST00000472729 OR9K2Q8NGE7 335 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 SLC47A1Q96FL8 570 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 ANKRD27Q96NW4 1050 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 CPPED1Q9BRF8 314 aaPredicted RBP17.17■□□□□ 0.34
COMMD1-208ENST00000472729 TMUB1Q9BVT8 246 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 RASD1Q9Y272 281 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 FLVCR1Q9Y5Y0 555 aa17.17■□□□□ 0.34
COMMD1-208ENST00000472729 TRBV5-3A0A0A0MS03 114 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 RAMP1O60894 148 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 COX5AP20674 150 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 RPS5P46782 204 aaKnown RBP17.16■□□□□ 0.34
COMMD1-208ENST00000472729 MTPNP58546 118 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 FOXD4Q12950 439 aaPredicted RBP17.16■□□□□ 0.34
COMMD1-208ENST00000472729 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
COMMD1-208ENST00000472729 INTS11Q5TA45 600 aaKnown RBP17.16■□□□□ 0.34
COMMD1-208ENST00000472729 KLHL24Q6TFL4 600 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM108Q6UXF1 575 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 ZNF611Q8N823 705 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 POMGNT2Q8NAT1 580 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 OR52N5Q8NH56 324 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 MFSD8Q8NHS3 518 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 SLC38A4Q969I6 547 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 FBXW5Q969U6 566 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 PERPQ96FX8 193 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 EPYCQ99645 322 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 IKZF5Q9H5V7 419 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 PIF1Q9H611 641 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 C12orf10Q9HB07 376 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 FGFR1OP2Q9NVK5 253 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 MALT1Q9UDY8 824 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 TESQ9UGI8 421 aaKnown RBP17.16■□□□□ 0.34
COMMD1-208ENST00000472729 CHST2Q9Y4C5 530 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 AKAP6Q13023 2319 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 F8P00451 2351 aa17.16■□□□□ 0.34
COMMD1-208ENST00000472729 TMCC2O75069 709 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 ZNF43P17038 809 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 EDNRAP25101 427 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 LOXP28300 417 aaPredicted RBP17.15■□□□□ 0.34
COMMD1-208ENST00000472729 RIPPLY3P57055 190 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 BSPH1Q075Z2 132 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 Q5PR19 223 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 C9orf135Q5VTT2 229 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 LSMEM1Q8N8F7 131 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 WFDC11Q8NEX6 87 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 GTPBP3Q969Y2 492 aaKnown RBP17.15■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM45BQ96B21 275 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 RADILQ96JH8 1075 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 TMEM204Q9BSN7 226 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 FAIMQ9NVQ4 179 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 POU2F3Q9UKI9 436 aa17.15■□□□□ 0.34
COMMD1-208ENST00000472729 ABCA4P78363 2273 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 A0A1B0GWA3 101 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 OR6C65A6NJZ3 312 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 PLAUP00749 431 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 FOSL1P15407 271 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 CDH2P19022 906 aaPredicted RBP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 SF3A3Q12874 501 aaKnown RBP eCLIP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 NET1Q7Z628 596 aaPredicted RBP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 PATL1Q86TB9 770 aaKnown RBP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 C10orf111Q8N326 155 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 C10orf53Q8N6V4 93 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 SMYD1Q8NB12 490 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 ECSITQ9BQ95 431 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 SLCO5A1Q9H2Y9 848 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 ALG2Q9H553 416 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF385DQ9H6B1 395 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 MED4Q9NPJ6 270 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 MGAT4BQ9UQ53 548 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 LAMP3Q9UQV4 416 aa17.14■□□□□ 0.33
COMMD1-208ENST00000472729 MAGED1Q9Y5V3 778 aaPredicted RBP17.14■□□□□ 0.33
COMMD1-208ENST00000472729 TMEM229AB2RXF0 380 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 M0QX08 132 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 AIM2O14862 343 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 TPST1O60507 370 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 NQO1P15559 274 aaKnown RBP17.13■□□□□ 0.33
COMMD1-208ENST00000472729 MPGP29372 298 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 RPS4XP62701 263 aaKnown RBP17.13■□□□□ 0.33
COMMD1-208ENST00000472729 MFSD13AQ14CX5 517 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 ADRM1Q16186 407 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 TRMT5Q32P41 509 aaKnown RBP17.13■□□□□ 0.33
COMMD1-208ENST00000472729 FAM69AQ5T7M9 428 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 TSPO2Q5TGU0 170 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 ADAM5Q6NVV9 412 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 C17orf78Q8N4C9 275 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 PCYOX1LQ8NBM8 494 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 OR10A6Q8NH74 314 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 RASSF5Q8WWW0 418 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 TRMT61AQ96FX7 289 aaKnown RBP17.13■□□□□ 0.33
COMMD1-208ENST00000472729 KAT8Q9H7Z6 458 aaKnown RBP17.13■□□□□ 0.33
COMMD1-208ENST00000472729 SLC7A10Q9NS82 523 aa17.13■□□□□ 0.33
COMMD1-208ENST00000472729 TRAV36DV7A0A075B6V5 113 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 BBIP1A8MTZ0 92 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF587BE7ETH6 402 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms