RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 IGKV3-11P04433 115 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 PCCAP05165 728 aaPredicted RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 ICAM2P13598 275 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 PCMT1P22061 227 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 HMGB2P26583 209 aaKnown RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 BTCP35070 178 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 CASP4P49662 377 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 PPOXP50336 477 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 DLX1P56177 255 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 KLRC3Q07444 240 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 MESDQ14696 234 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 PARP15Q460N3 678 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 KHDRBS2Q5VWX1 349 aaKnown RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 C6orf89Q6UWU4 347 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 MDS2Q8NDY4 140 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 TRMT10AQ8TBZ6 339 aaKnown RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 MARCH1Q8TCQ1 289 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 TMEM158Q8WZ71 300 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 NDRG1Q92597 394 aaKnown RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 EFHD2Q96C19 240 aaPredicted RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 TSGA13Q96PP4 275 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 RNF2Q99496 336 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 ERP44Q9BS26 406 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 RBKSQ9H477 322 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 UFSP2Q9NUQ7 469 aa3.5□□□□□ -1.85
CLK1-209ENST00000472679 ZNF223Q9UK11 482 aaPredicted RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 PHF3Q92576 2039 aaKnown RBP3.49□□□□□ -1.85
CLK1-209ENST00000472679 KIF16BQ96L93 1317 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 NSG1A0A0A6YYJ2 146 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 ARPC3O15145 178 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 UGT1A9O60656 530 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 AP2A1O95782 977 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 OTX2P32243 289 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 DDOSTP39656 456 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 CCR6P51684 374 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 GANABQ14697 944 aaKnown RBP3.49□□□□□ -1.85
CLK1-209ENST00000472679 C1orf220Q5T0J3 134 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 TMEM225Q6GV28 225 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 OR52E8Q6IFG1 317 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 PGAP1Q75T13 922 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 TMEM61Q8N0U2 210 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 GMCL1P1Q8NEA9 526 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 FCRL1Q96LA6 429 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 EML4Q9HC35 981 aaKnown RBP3.49□□□□□ -1.85
CLK1-209ENST00000472679 RAB26Q9ULW5 256 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 COPS3Q9UNS2 423 aa3.49□□□□□ -1.85
CLK1-209ENST00000472679 RPL36Q9Y3U8 105 aaKnown RBP3.49□□□□□ -1.85
CLK1-209ENST00000472679 IGLV3-16A0A075B6K0 115 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ANKRD63C9JTQ0 380 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 AGPAT2O15120 278 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ATP5LO75964 103 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 KLK3P07288 261 aaPredicted RBP3.48□□□□□ -1.85
CLK1-209ENST00000472679 CRISP2P16562 243 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 QARSP47897 775 aaKnown RBP3.48□□□□□ -1.85
CLK1-209ENST00000472679 LRRC63Q05C16 580 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 VGLL4Q14135 290 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 GPNMBQ14956 572 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 BOLA3Q53S33 107 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 Q6ZN92 141 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ZNF620Q6ZNG0 422 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 PAQR7Q86WK9 346 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 VSTM4Q8IW00 320 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 CCDC65Q8IXS2 484 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ZNF786Q8N393 782 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 EMG1Q92979 244 aaKnown RBP3.48□□□□□ -1.85
CLK1-209ENST00000472679 OXGR1Q96P68 337 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 RAB34Q9BZG1 259 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ACTR6Q9GZN1 396 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 REEP4Q9H6H4 257 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 SMOXQ9NWM0 555 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 THUMPD1Q9NXG2 353 aaKnown RBP3.48□□□□□ -1.85
CLK1-209ENST00000472679 SEC14L3Q9UDX4 400 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ISY1Q9ULR0 285 aaKnown RBP3.48□□□□□ -1.85
CLK1-209ENST00000472679 SNX6Q9UNH7 406 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 ATP6V0A2Q9Y487 856 aa3.48□□□□□ -1.85
CLK1-209ENST00000472679 KIR2DL5BA0A0G2JN68 375 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 KIR2DL5BA0A0G2JPC4 375 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 NKX2-6A6NCS4 301 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 RBMY1BA6NDE4 496 aaKnown RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 RBMY1EA6NEQ0 496 aaKnown RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 DIRAS1O95057 198 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 RBMY1DP0C7P1 496 aaKnown RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 RBMY1A1P0DJD3 496 aaKnown RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 FMO3P31513 532 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 GLP1RP43220 463 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 GSSP48637 474 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 CSNK1DP48730 415 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 GPM6AP51674 278 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 EFNB2P52799 333 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 CRISP3P54108 245 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 KLRB1Q12918 225 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 EBI3Q14213 229 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 PSG5Q15238 335 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 ATP6AP1Q15904 470 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 MICBQ29980 383 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 DMRTC1Q5HYR2 192 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 SAMD4BQ5PRF9 694 aaKnown RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 GET4Q7L5D6 327 aaPredicted RBP3.47□□□□□ -1.85
CLK1-209ENST00000472679 CCDC50Q8IVM0 306 aa3.47□□□□□ -1.85
CLK1-209ENST00000472679 KIR2DL5AQ8N109 375 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms