RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TMEM64Q6YI46 380 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 APH1AQ96BI3 265 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TIMD4Q96H15 378 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FOXQ1Q9C009 403 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LANCL2Q9NS86 450 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LRRC30A6NM36 301 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CLDN6P56747 220 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CXADRP78310 365 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 COQ5Q5HYK3 327 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CDCA2Q69YH5 1023 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 KDM4DQ6B0I6 523 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR7G3Q8NG95 312 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR4A16Q8NH70 328 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMEM239Q8WW34 195 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC19A3Q9BZV2 496 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TAAR2Q9P1P5 351 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ANTXRLA6NF34 631 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC10A2Q12908 348 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ATP6AP1Q15904 470 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NETO1Q8TDF5 533 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PBX4Q9BYU1 374 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 UBR1Q8IWV7 1749 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FANCGO15287 622 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MITFO75030 526 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TESK1Q15569 626 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CCBE1Q6UXH8 406 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 UNC5DQ6UXZ4 953 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF419Q96HQ0 510 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CEP250Q9BV73 2442 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FUOMA2VDF0 154 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TBPP20226 339 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 KIR2DL3P43628 341 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FAM198BQ6UWH4 519 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR2T35Q8NGX2 323 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 APH1BQ8WW43 257 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NDFIP1Q9BT67 221 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TCEAL2Q9H3H9 227 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ABHD16AO95870 558 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GCGP01275 180 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CHRNB1P11230 501 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF425Q6IV72 752 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SCML4Q8N228 414 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR2M3Q8NG83 312 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 KCNJ15Q99712 375 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SMCHD1A6NHR9 2005 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 F5H5P2 479 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TRIM23P36406 574 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RING1Q06587 406 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MOGQ16653 247 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PTCRAQ6ISU1 281 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LETMD1Q6P1Q0 360 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TP53INP2Q8IXH6 220 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AGBL5Q8NDL9 886 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TANKQ92844 425 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NAT6Q93015 286 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TNFRSF19Q9NS68 423 aa12.37□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RASAL1O95294 804 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CLDN1O95832 211 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FGF3P11487 239 aaPredicted RBP12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CPT2P23786 658 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF684Q5T5D7 378 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NDUFAF7Q7L592 441 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMEM217Q8N7C4 229 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CLDN8P56748 225 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC22A10Q63ZE4 541 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MED12Q93074 2177 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 A0A1W2PS29 197 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DPM1O60762 260 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GPR32O75388 356 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FCGR2AP12318 317 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CTSL3PQ5NE16 218 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF732B4DXR9 585 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 H7C1C5 153 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LCN6P62502 163 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 BAXQ07812 192 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR13C5Q8NGS8 318 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR13C2Q8NGS9 318 aa12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DHCR7Q9UBM7 475 aaKnown RBP12.36□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SURF4O15260 269 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms