RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SLC9B1Q4ZJI4 515 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CFAP157Q5JU67 520 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 REP15Q6BDI9 236 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CLEC6AQ6EIG7 209 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 GRINAQ7Z429 371 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 MDP1Q86V88 176 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 LRP11Q86VZ4 500 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CLEC4FQ8N1N0 589 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ARFGAP2Q8N6H7 521 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 KIR3DL3Q8N743 410 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM99Q8N816 258 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 OR9K2Q8NGE7 335 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 OR56A1Q8NGH5 318 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 FAM110DQ8TAY7 271 aaPredicted RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 HOXB13Q92826 284 aaPredicted RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 BCL2L2Q92843 193 aaPredicted RBP5.91□□□□□ -1.46
HDAC1-204ENST00000471488 OR7D2Q96RA2 312 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 PAFAH2Q99487 392 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 GAL3ST1Q99999 423 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 CCDC106Q9BWC9 280 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF416Q9BWM5 594 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 MS4A5Q9H3V2 200 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF442Q9H7R0 627 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 NOX3Q9HBY0 568 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 OBP2BQ9NPH6 170 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 G6PC2Q9NQR9 355 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM216Q9P0N5 145 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 TMED7Q9Y3B3 224 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 VWFP04275 2813 aa5.91□□□□□ -1.46
HDAC1-204ENST00000471488 POM121CA8CG34 1229 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ZSCAN12O43309 604 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 FCMRO60667 390 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 STX11O75558 287 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 UPK3AO75631 287 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 NCR1O76036 304 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 C6orf47O95873 294 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 PRB2P02812 416 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 CRYBA1P05813 215 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 GPIP06744 558 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 LINC00032P0C843 101 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 IMPDH2P12268 514 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 HPCAL1P37235 193 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 MAGEB1P43366 347 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ASMTP46597 345 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 SERPINB9P50453 376 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM33P57088 247 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 HPCAP84074 193 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 TRMT5Q32P41 509 aaKnown RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 FAM153CQ494X1 144 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 LIPMQ5VYY2 423 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 CARD17Q5XLA6 110 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 TMEM154Q6P9G4 183 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ADGRG3Q86Y34 549 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 SLC22A9Q8IVM8 553 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 WDFY1Q8IWB7 410 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 DDIASQ8IXT1 998 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 GPR137CQ8N3F9 429 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 CCDC63Q8NA47 563 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 NOA1Q8NC60 698 aaKnown RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 OR7A2PQ8NGA2 310 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 FAM76AQ8TAV0 307 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ST7LQ8TDW4 575 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 TMIGD2Q96BF3 282 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 MS4A3Q96HJ5 214 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 SDF2Q99470 211 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 NAPGQ99747 312 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 TAPBPLQ9BX59 468 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 C1QTNF3Q9BXJ4 246 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 MS4A7Q9GZW8 240 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 RAB17Q9H0T7 212 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 SIRT3Q9NTG7 399 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ACSS1Q9NUB1 689 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 C1orf109Q9NX04 203 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 PDP1Q9P0J1 537 aaPredicted RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 MYEF2Q9P2K5 600 aaKnown RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ZNF69Q9UC07 566 aa5.9□□□□□ -1.46
HDAC1-204ENST00000471488 WBP11Q9Y2W2 641 aaKnown RBP5.9□□□□□ -1.46
HDAC1-204ENST00000471488 ARPC4-TTLL3A0A0A6YYG9 625 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CLDN24A6NM45 220 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CLDN25C9JDP6 229 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 J3QLI3 93 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SLC28A1O00337 649 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 AP3D1O14617 1153 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 DNPH1O43598 174 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 BCAS1O75363 584 aaPredicted RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 UGT2B17O75795 530 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 HLA-HP01893 362 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GSNP06396 782 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CHRM4P08173 479 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 IGFBP1P08833 259 aaPredicted RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 IFI6P09912 130 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CBR1P16152 277 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 MATN1P21941 496 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CXCR1P25024 350 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GTF2E2P29084 291 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms