RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LARS2Q15031 903 aaKnown RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 BLOC1S3Q6QNY0 202 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 B3GLCTQ6Y288 498 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 GPAT4Q86UL3 456 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 WDR31Q8NA23 367 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 OR9K2Q8NGE7 335 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 NFKBIDQ8NI38 313 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 THOC1Q96FV9 657 aaKnown RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 NAA11Q9BSU3 229 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 CISD1Q9NZ45 108 aaKnown RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 SEC14L4Q9UDX3 406 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 GDF2Q9UK05 429 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-203ENST00000471344 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
COL1A1-203ENST00000471344 AQP7P3A6NL99 342 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 IGHV4-39P01824 125 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 GPIP06744 558 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 BMP2P12643 396 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 LRIF1Q5T3J3 769 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 C1orf140Q5VVS0 124 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 P2RY8Q86VZ1 359 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 GOLGA6L1Q8N7Z2 621 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 GTPBP3Q969Y2 492 aaKnown RBP13.48□□□□□ -0.25
COL1A1-203ENST00000471344 SPDL1Q96EA4 605 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 TRAF4Q9BUZ4 470 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-203ENST00000471344 PRR14Q9BWN1 585 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 BCL2L10Q9HD36 194 aa13.48□□□□□ -0.25
COL1A1-203ENST00000471344 PLCE1Q9P212 2302 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 TRBV5-3A0A0A0MS03 114 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 A8MVM7 634 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 E7EQL1 145 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 M0R1B8 84 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 TPST1O60507 370 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 NPIPB7O75200 414 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 TGDSO95455 350 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 ARAFP10398 606 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-203ENST00000471344 HTR2AP28223 471 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 PCSK6P29122 969 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 ACVR1BP36896 505 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 COPZ1P61923 177 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 EGR4Q05215 589 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 FADDQ13158 208 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 VEZF1Q14119 521 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 AGKQ53H12 422 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 LINGO2Q7L985 606 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 BBS10Q8TAM1 723 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 HTRA1Q92743 480 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 TMEM45BQ96B21 275 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 WFDC6Q9BQY6 131 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 CCDC28BQ9BUN5 200 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 PTDSS2Q9BVG9 487 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 UPB1Q9UBR1 384 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 CR1P17927 2039 aa13.47□□□□□ -0.25
COL1A1-203ENST00000471344 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 FTCDNL1E5RQL4 147 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 RNF223E7ERA6 249 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 TMCC2O75069 709 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 CD40P25942 277 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 RPS5P46782 204 aaKnown RBP13.46□□□□□ -0.25
COL1A1-203ENST00000471344 SELENOPP49908 381 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 MAP2K6P52564 334 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 HIKESHIQ53FT3 197 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 DTX2Q86UW9 622 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 KDM8Q8N371 416 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 DYDC1Q8WWB3 177 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 CKAP2Q8WWK9 683 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 KTI12Q96EK9 354 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-203ENST00000471344 SLCO5A1Q9H2Y9 848 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.25
COL1A1-203ENST00000471344 DCTN4Q9UJW0 460 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 ZNF232Q9UNY5 417 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 IFT52Q9Y366 437 aa13.46□□□□□ -0.25
COL1A1-203ENST00000471344 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 AQP1P29972 269 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 ADRM1Q16186 407 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 PRAMEF8Q5VWM4 474 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 PRAMEF7Q5VXH5 474 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 C11orf71Q6IPW1 123 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 SLC22A25Q6T423 547 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 CREB3L2Q70SY1 520 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 EPHX4Q8IUS5 362 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
COL1A1-203ENST00000471344 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-203ENST00000471344 CPPED1Q9BRF8 314 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms