RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 KTI12Q96EK9 354 aaPredicted RBP11.17□□□□□ -0.62
PPP1R3F-204ENST00000471261 ELAC2Q9BQ52 826 aaKnown RBP11.17□□□□□ -0.62
PPP1R3F-204ENST00000471261 PLEKHF2Q9H8W4 249 aa11.17□□□□□ -0.62
PPP1R3F-204ENST00000471261 TMEM27Q9HBJ8 222 aa11.17□□□□□ -0.62
PPP1R3F-204ENST00000471261 TESQ9UGI8 421 aaKnown RBP11.17□□□□□ -0.62
PPP1R3F-204ENST00000471261 AQP7P3A6NL99 342 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 CCT8L1PA6NM43 557 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 SLC22A2O15244 555 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 CCDC22O60826 627 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 NPPAP01160 153 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 RAF1P04049 648 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 PNMTP11086 282 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 PTNP21246 168 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 NTF4P34130 210 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 SEC24CP53992 1094 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 OR1Q1Q15612 314 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 DUSP7Q16829 419 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 BEX5Q5H9J7 111 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 FBXW9Q5XUX1 488 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 TMEM225Q6GV28 225 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 ULK3Q6PHR2 472 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 PAMR1Q6UXH9 720 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 SPATA21Q7Z572 469 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 P3H2Q8IVL5 708 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 VANGL1Q8TAA9 524 aaPredicted RBP11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 OR10A4Q9H209 315 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 PARPBPQ9NWS1 579 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 SLC9A8Q9Y2E8 581 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 FLVCR1Q9Y5Y0 555 aa11.16□□□□□ -0.62
PPP1R3F-204ENST00000471261 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 AIM2O14862 343 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 NPIPB7O75200 414 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 RAD51DO75771 328 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 CNOT4O95628 575 aaKnown RBP11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 CBLP22681 906 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 GZMMP51124 257 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 GYS2P54840 703 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 NR1H2P55055 460 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 IL1RL1Q01638 556 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 EGR4Q05215 589 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 FAPQ12884 760 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 AAED1Q7RTV5 226 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 GPR32P1Q8NGA4 272 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 OR9K2Q8NGE7 335 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 OR6T1Q8NGN1 323 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 MFSD8Q8NHS3 518 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 RP9Q8TA86 221 aaKnown RBP11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 TAMM41Q96BW9 452 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 SLC47A1Q96FL8 570 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 PLPPR2Q96GM1 343 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 MCHR1Q99705 422 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 PTDSS2Q9BVG9 487 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 NSRP1Q9H0G5 558 aaKnown RBP11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 EVA1AQ9H8M9 152 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 C12orf10Q9HB07 376 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 ASB6Q9NWX5 421 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 UPB1Q9UBR1 384 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 USP22Q9UPT9 525 aa11.15□□□□□ -0.62
PPP1R3F-204ENST00000471261 IGKV1D-42A0A075B6H8 117 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 A0A0B4J2E0 115 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 A0A1B0GX12 115 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 CIB4A0PJX0 185 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 KLF4O43474 513 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 TPST2O60704 377 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 KRT33AO76009 404 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 ATE1O95260 518 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 LGI1O95970 557 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 C8BP07358 591 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 COX4I1P13073 169 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 GGT1P19440 569 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 COX5AP20674 150 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 CDH12P55289 794 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 TAB1Q15750 504 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 NRF1Q16656 503 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 C9orf135Q5VTT2 229 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 FAM91A1Q658Y4 838 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 CPLX4Q7Z7G2 160 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 CALHM3Q86XJ0 350 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 RBM45Q8IUH3 476 aaKnown RBP11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 KDM8Q8N371 416 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 C10orf53Q8N6V4 93 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 RASSF5Q8WWW0 418 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 PROX1Q92786 737 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 TAAR8Q969N4 342 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 ARHGDIGQ99819 225 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 SF3B5Q9BWJ5 86 aaKnown RBP11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 SEC14L4Q9UDX3 406 aa11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
PPP1R3F-204ENST00000471261 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms