RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 DRD2P14416 443 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ENPP1P22413 925 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CA5AP35218 305 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SLC6A8P48029 635 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CEBPDP49716 269 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SUB1P53999 127 aaKnown RBP eCLIP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MTCP1P56278 107 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GABARAPL2P60520 117 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 DOC2BQ14184 412 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR5M10Q6IEU7 315 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 HSD17B11Q8NBQ5 300 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR10AD1Q8NGE0 317 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR9Q2Q8NGE9 314 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GPR119Q8TDV5 335 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TRUB1Q8WWH5 349 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MENTQ9BUN1 341 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 AMBRA1Q9C0C7 1298 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PARP12Q9H0J9 701 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 FBXO8Q9NRD0 319 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 C5AR2Q9P296 337 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SIX4Q9UIU6 781 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 V9GY05 133 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 VIRMAQ69YN4 1812 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TRAV27A0A087WT01 109 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SOWAHBA6NEL2 793 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 UPK1BO75841 260 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MMP2P08253 660 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR5G3P0C626 314 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 KIR2DL3P43628 341 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CXCR4P61073 352 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PPP2CBP62714 309 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PTP4A2Q12974 167 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CEBPEQ15744 281 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TATDN3Q17R31 274 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 DEFB133Q30KQ1 61 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM244Q5VVB8 128 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM182Q6ZP80 229 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ILDR1Q86SU0 546 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TSPYL5Q86VY4 417 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CLECL1Q8IZS7 167 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 BATF2Q8N1L9 274 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SCAMP4Q969E2 229 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CAPNS2Q96L46 248 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ULBP2Q9BZM5 246 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 LHPPQ9H008 270 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 XYLT2Q9H1B5 865 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GAL3ST2Q9H3Q3 398 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 IKZF5Q9H5V7 419 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF835Q9Y2P0 537 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PCDHGA9Q9Y5G4 932 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TIMM9Q9Y5J7 89 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SPATA31A5Q5VU36 1347 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SPATA31A7Q8IWB4 1347 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM269A0A1B0GVZ9 245 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 FAM159BA6NKW6 160 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 LRRC30A6NM36 301 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 K7ERQ8 282 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TNFRSF10AO00220 468 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ARPC3O15145 178 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 STC2O76061 302 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GRPP07492 148 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MPC1LP0DKB6 136 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MPGP29372 298 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 HMGCLP35914 325 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 NUDT1P36639 197 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GIPRP48546 466 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 WNT4P56705 351 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GPR176Q14439 515 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PCK2Q16822 640 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ZMAT1Q5H9K5 638 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 HIST2H3AQ71DI3 136 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 KLHDC8AQ8IYD2 350 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 IQCKQ8N0W5 287 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 DNAJC5GQ8N7S2 189 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR13J1Q8NGT2 312 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR10K1Q8NGX5 313 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 YIPF5Q969M3 257 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ZDHHC16Q969W1 377 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 BOD1Q96IK1 185 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 OR8B4Q96RC9 309 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 UQCC2Q9BRT2 126 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 FGFBP2Q9BYJ0 223 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CALHM2Q9HA72 323 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CPNE5Q9HCH3 593 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PRDM4Q9UKN5 801 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SHANK3Q9BYB0 1731 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 XKRY2A2RUG3 117 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 SLC9B1P1A6NJY1 282 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 H3BVH4 76 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 EIF3FO00303 357 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-210ENST00000471181 ABCD4O14678 606 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 MBP02144 154 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 ITGAMP11215 1152 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 RAD52P43351 418 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 PCLAFQ15004 111 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 NPSR1Q6W5P4 371 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 RFPL4BQ6ZWI9 263 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 TCEAL8Q8IYN2 117 aa6.44□□□□□ -1.38
BRCA1-210ENST00000471181 SIMC1Q8NDZ2 872 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms