RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SLC39A4Q6P5W5 647 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 SASS6Q6UVJ0 657 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 TIFABQ6ZNK6 161 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 NDUFAF7Q7L592 441 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 SNX20Q7Z614 316 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 RBM45Q8IUH3 476 aaKnown RBP3.39□□□□□ -1.87
COL11A1-208ENST00000470170 OR5T1Q8NG75 326 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 MCHR2Q969V1 340 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 CERS2Q96G23 380 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 GLT1D1Q96MS3 346 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 GPR137Q96N19 417 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 OR5M11Q96RB7 305 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 SELENOSQ9BQE4 189 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 HES7Q9BYE0 225 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 MRPS30Q9NP92 439 aaKnown RBP3.39□□□□□ -1.87
COL11A1-208ENST00000470170 NT5MQ9NPB1 228 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 TUBG2Q9NRH3 451 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 UFSP2Q9NUQ7 469 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 MIS18AQ9NYP9 233 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 RBAKQ9NYW8 714 aaPredicted RBP3.39□□□□□ -1.87
COL11A1-208ENST00000470170 AHSPQ9NZD4 102 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 TMEM9Q9P0T7 183 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 STOX2Q9P2F5 926 aaPredicted RBP3.39□□□□□ -1.87
COL11A1-208ENST00000470170 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 RHBDD3Q9Y3P4 386 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 NPTNQ9Y639 398 aa3.39□□□□□ -1.87
COL11A1-208ENST00000470170 PPIAL4EA0A075B759 164 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 C1orf232A0A0U1RR37 186 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 TRABD2BA6NFA1 517 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 A8MUA0 341 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 A8MX80 341 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 FOXE1O00358 373 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CHUKO15111 745 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 JAK2O60674 1132 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ERCC1P07992 297 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 UBTFL1P0CB47 393 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 PPIAL4FP0DN26 164 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CD40LGP29965 261 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 LCN1P31025 176 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 TNFSF10P50591 281 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CDH6P55285 790 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CSNK1G2P78368 415 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CASP8Q14790 479 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 HSDL1Q3SXM5 330 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 SBK1Q52WX2 424 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 SMUG1Q53HV7 270 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 C6orf226Q5I0X4 101 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 PAGE2BQ5JRK9 111 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 GPR157Q5UAW9 335 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 PYHIN1Q6K0P9 492 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 Q6ZRG5 221 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 NLRP9Q7RTR0 991 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 SLC22A16Q86VW1 577 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 C17orf64Q86WR6 236 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ZNF677Q86XU0 584 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 APOBEC3FQ8IUX4 373 aaKnown RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ITPRIPQ8IWB1 547 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 GPR65Q8IYL9 337 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 GABRG1Q8N1C3 465 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 GTPBP8Q8N3Z3 284 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 Q8N9G6 341 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 TMEM104Q8NE00 496 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 FBXL13Q8NEE6 735 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 FAM83FQ8NEG4 500 aaPredicted RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 OR7G1Q8NGA0 311 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 RHEBL1Q8TAI7 183 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 DTX3LQ8TDB6 740 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ELMO1Q92556 727 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CNPY3Q9BT09 278 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 C20orf24Q9BUV8 137 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 C9orf16Q9BUW7 83 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 TM6SF2Q9BZW4 377 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ELOVL3Q9HB03 270 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ADGRL4Q9HBW9 690 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 MCCC2Q9HCC0 563 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 CSNK1G1Q9HCP0 422 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
COL11A1-208ENST00000470170 IFNKQ9P0W0 207 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 ENPP5Q9UJA9 477 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 KLHL21Q9UJP4 597 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 DDX19BQ9UMR2 479 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 RASD1Q9Y272 281 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 WDR45Q9Y484 360 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 PPIAL4AQ9Y536 164 aa3.38□□□□□ -1.87
COL11A1-208ENST00000470170 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 WASHC1A8K0Z3 465 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 SDHDO14521 159 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ZSCAN12O43309 604 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TRAPPC3O43617 180 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 KDELR3O43731 214 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HIST1H2AGP0C0S8 130 aaPredicted RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HSMCR30P0CW71 290 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 NQO2P16083 231 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms