RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KCPQ6ZWJ8 1503 aa3.65□□□□□ -1.82
LSM5-209ENST00000468872 ABCA3Q99758 1704 aa3.65□□□□□ -1.82
LSM5-209ENST00000468872 C10orf71Q711Q0 1435 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 IGHV7-81A0A0B4J1V7 117 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 A0A1B0GUS0 222 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 A0A1W2PNU3 283 aaPredicted RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 EPOPA6NHQ4 379 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 ZFP92A6NM28 416 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 TRDCB7Z8K6 153 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 E7ESA3 106 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 F5H6K3 240 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 OR10H3O60404 316 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 TBL1XO60907 577 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 ECI2O75521 394 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 SCGNO76038 276 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 LYPD3O95274 346 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 LALBAP00709 142 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 IGKV3-15P01624 115 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 RNH1P13489 461 aaKnown RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 POU2F1P14859 743 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 GCAP28676 217 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 YWHABP31946 246 aaKnown RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 MAP3K8P41279 467 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 HLCSP50747 726 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 HNRNPA3P51991 378 aaKnown RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 RPS8P62241 208 aaKnown RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 KLRC3Q07444 240 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 RIPK1Q13546 671 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 RNF212Q495C1 297 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 LCA5Q86VQ0 697 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 PPP1R27Q86WC6 154 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 NRMQ8IXM6 262 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 TCTEX1D2Q8WW35 142 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 SHC3Q92529 594 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 NEIL2Q969S2 332 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 MTMR9Q96QG7 549 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 ZBTB18Q99592 522 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 RPRD2Q5VT52 1461 aaKnown RBP3.65□□□□□ -1.83
LSM5-209ENST00000468872 MLH3Q9UHC1 1453 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 UGGT2Q9NYU1 1516 aa3.65□□□□□ -1.83
LSM5-209ENST00000468872 SYNJ2BP-COX16A0A087WUM0 186 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 A8MU10 97 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 E7ENQ6 273 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 PRKAB2O43741 272 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 DIRAS1O95057 198 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 LGALS2P05162 132 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 HSMCR30P0CW71 290 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 DBTP11182 482 aaKnown RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 PSMB1P20618 241 aaKnown RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 HMGB2P26583 209 aaKnown RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 NTSP30990 170 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 PTGDSP41222 190 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CCT3P49368 545 aaKnown RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 TNFRSF17Q02223 184 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CHRNB3Q05901 458 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 KLRB1Q12918 225 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 SLC15A2Q16348 729 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 C1orf220Q5T0J3 134 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 PDZK1Q5T2W1 519 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 GPRC6AQ5T6X5 926 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 HSD17B13Q7Z5P4 300 aaPredicted RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 CCDC50Q8IVM0 306 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 LRRC75A-AS1Q8N1F1 130 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 BHLHE23Q8NDY6 225 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 ZNF564Q8TBZ8 553 aaPredicted RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 RAPGEF5Q92565 580 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 EFHD2Q96C19 240 aaPredicted RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 SLC38A2Q96QD8 506 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CCNL2Q96S94 520 aaPredicted RBP3.64□□□□□ -1.83
LSM5-209ENST00000468872 MAPKAP1Q9BPZ7 522 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CNPY3Q9BT09 278 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 PARD6BQ9BYG5 372 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 EHD1Q9H4M9 534 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 COX16Q9P0S2 106 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 ADAM28Q9UKQ2 775 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CLSPNQ9HAW4 1339 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 CENPFP49454 3210 aa3.64□□□□□ -1.83
LSM5-209ENST00000468872 COL22A1Q8NFW1 1626 aaPredicted RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 A0A0G2JRQ6 117 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 NBR2O15453 112 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 RGS16O15492 202 aaPredicted RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 PFKFB2O60825 505 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 AP2A1O95782 977 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 IGHV3-48P01763 117 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 OPN1MWP04001 364 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 OPN1MW2P0DN77 364 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 OPN1MW3P0DN78 364 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 COX5AP20674 150 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 TAGLN2P37802 199 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 MAGEA8P43361 318 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 QARSP47897 775 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 BIDP55957 195 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 NCBP1Q09161 790 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 CCDC173Q0VFZ6 552 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 GRB7Q14451 532 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 DPYSL2Q16555 572 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 CFAP221Q4G0U5 840 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms