RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SH2D2AQ9NP31 389 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 ZNF292O60281 2723 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 CNOT1A5YKK6 2376 aaKnown RBP17.18■□□□□ 0.34
SMC4-209ENST00000468653 M0R3G1 203 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 NPIPB7O75200 414 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 LCKP06239 509 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 IRF3Q14653 427 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 ALG10Q5BKT4 473 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 SLC25A53Q5H9E4 307 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 UBE2UQ5VVX9 321 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 BBS1Q8NFJ9 593 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 PSMF1Q92530 271 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 C1GALT1C1Q96EU7 318 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 CRELD1Q96HD1 420 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 FER1L6-AS2Q96M78 137 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 PTDSS2Q9BVG9 487 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 TEKT2Q9UIF3 430 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 KLHL21Q9UJP4 597 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 ETV2O00321 342 aaPredicted RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 OR2T1O43869 369 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 RAB36O95755 333 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 P04436 131 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 PAICSP22234 425 aaKnown RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 ITGA3P26006 1051 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 HTR1FP30939 366 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 ERVK-25P63136 954 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 RAB40BQ12829 278 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 AIMP2Q13155 320 aaKnown RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 ITGADQ13349 1161 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 SYT6Q5T7P8 510 aaPredicted RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 IGF2-ASQ6U949 168 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 BEST3Q8N1M1 668 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 FAM98AQ8NCA5 519 aaKnown RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 ATP6V1C2Q8NEY4 427 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 OR52E2Q8NGJ4 325 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 OR52I1Q8NGK6 324 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 RELTQ969Z4 430 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 DDIT4LQ96D03 193 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 NMD3Q96D46 503 aaKnown RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 LGALS12Q96DT0 336 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 GPX7Q96SL4 187 aaPredicted RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 KATNB1Q9BVA0 655 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 MED20Q9H944 212 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 NRIP3Q9NQ35 241 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 KLHL1Q9NR64 748 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 MRPS18AQ9NVS2 196 aaKnown RBP17.17■□□□□ 0.34
SMC4-209ENST00000468653 DLL3Q9NYJ7 618 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 TAS2R16Q9NYV7 291 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 STMN3Q9NZ72 180 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 ADAM18Q9Y3Q7 739 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 CFAP54Q96N23 3096 aa17.17■□□□□ 0.34
SMC4-209ENST00000468653 ANKRD33BA6NCL7 494 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 SHISA8B8ZZ34 492 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 G3V3Y1 287 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 IDH3BO43837 385 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 NOL3O60936 208 aaKnown RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 SNX4O95219 450 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 ADRA2AP08913 450 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 LIFP15018 202 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 HIST1H1CP16403 213 aaKnown RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 TCEA1P23193 301 aaKnown RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 ACVR2AP27037 513 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 UQCRC1P31930 480 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 OC90Q02509 493 aaPredicted RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 RPL18Q07020 188 aaKnown RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 CRMP1Q14194 572 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 ZNF362Q5T0B9 420 aaPredicted RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 MDGA2Q7Z553 956 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 GPALPP1Q8IXQ4 340 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 OR4K13Q8NH42 304 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 ISOC1Q96CN7 298 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 JSRP1Q96MG2 331 aaPredicted RBP17.16■□□□□ 0.34
SMC4-209ENST00000468653 YIPF3Q9GZM5 350 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 PROK2Q9HC23 129 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 SERINC1Q9NRX5 453 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 ERGIC3Q9Y282 383 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 SLC6A5Q9Y345 797 aa17.16■□□□□ 0.34
SMC4-209ENST00000468653 SLC30A4O14863 429 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 SNPHO15079 494 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ARPC3O15145 178 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ZNF208O43345 1280 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 TRMUO75648 421 aaKnown RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 APOL3O95236 402 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 PTHP01270 115 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 F13BP05160 661 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ADORA3P0DMS8 318 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 TFPIP10646 304 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 LIPCP11150 499 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 DCKP27707 260 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 CYB561P49447 251 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 MAP2K6P52564 334 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 CTXN1P60606 82 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 KLHL12Q53G59 568 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 ABHD17BQ5VST6 288 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 NIPAL3Q6P499 406 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 MEPCEQ7L2J0 689 aaKnown RBP17.15■□□□□ 0.34
SMC4-209ENST00000468653 CYB561A3Q8NBI2 242 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 CLEC1AQ8NC01 280 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 SLC37A3Q8NCC5 494 aa17.15■□□□□ 0.34
SMC4-209ENST00000468653 OR1J4Q8NGS1 313 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms