RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 FOXK1P85037 733 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 AIMP2Q13155 320 aaKnown RBP18.62■□□□□ 0.57
TMEM53-207ENST00000468117 CXXC5Q7LFL8 322 aaKnown RBP18.62■□□□□ 0.57
TMEM53-207ENST00000468117 ATP6V1C2Q8NEY4 427 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 OR5M1Q8NGP8 315 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 POC1BQ8TC44 478 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 MUL1Q969V5 352 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 MRGPRX4Q96LA9 322 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 JSRP1Q96MG2 331 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-207ENST00000468117 GNRHR2Q96P88 292 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 MED20Q9H944 212 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 SEC14L4Q9UDX3 406 aa18.62■□□□□ 0.57
TMEM53-207ENST00000468117 NCKAP5O14513 1909 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 IL11P20809 199 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 CYB561P49447 251 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 CDH11P55287 796 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 OC90Q02509 493 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-207ENST00000468117 CAMK2BQ13554 666 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 SLC25A53Q5H9E4 307 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 FAM69AQ5T7M9 428 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 BORAQ6PGQ7 559 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 DPY19L2P2Q6ZN68 376 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 NANOGNBQ7Z5D8 188 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 ZNF227Q86WZ6 799 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 OR13F1Q8NGS4 319 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 STK35Q8TDR2 534 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 NTNG2Q96CW9 530 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 FER1L6-AS2Q96M78 137 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 TUBA1CQ9BQE3 449 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 HCAR1Q9BXC0 346 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 KLHL1Q9NR64 748 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 RYDENQ9NUL5 291 aaKnown RBP18.61■□□□□ 0.57
TMEM53-207ENST00000468117 SNTNA6NMZ2 147 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 RIIAD1A6NNX1 92 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 EFNA2O43921 213 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 APOL3O95236 402 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 HIST1H2ABP04908 130 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 UQCRC1P31930 480 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 ERVK-25P63136 954 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 RPL18Q07020 188 aaKnown RBP18.61■□□□□ 0.57
TMEM53-207ENST00000468117 NXNL2Q5VZ03 156 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 ARHGAP11AQ6P4F7 1023 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 HIST3H2AQ7L7L0 130 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 CYB561A3Q8NBI2 242 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 CLEC1AQ8NC01 280 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 RORBQ92753 470 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 HIST1H2ACQ93077 130 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 DGCR14Q96DF8 476 aaKnown RBP18.61■□□□□ 0.57
TMEM53-207ENST00000468117 ARL5BQ96KC2 179 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 KATNB1Q9BVA0 655 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 NRIP3Q9NQ35 241 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 TEKT2Q9UIF3 430 aa18.61■□□□□ 0.57
TMEM53-207ENST00000468117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.61■□□□□ 0.57
TMEM53-207ENST00000468117 ANKRD33BA6NCL7 494 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 ZNF99A8MXY4 864 aaPredicted RBP18.6■□□□□ 0.57
TMEM53-207ENST00000468117 SEC14L2O76054 403 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 AHSA1O95433 338 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 P04436 131 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 F13BP05160 661 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 LCKP06239 509 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 HK1P19367 917 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 DNASE1L1P49184 302 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 GP2P55259 537 aaKnown RBP18.6■□□□□ 0.57
TMEM53-207ENST00000468117 CRMP1Q14194 572 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 ALG10Q5BKT4 473 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 CLVS1Q8IUQ0 354 aaPredicted RBP18.6■□□□□ 0.57
TMEM53-207ENST00000468117 PSD4Q8NDX1 1056 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 OR1J4Q8NGS1 313 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 RFKQ969G6 155 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 FN3KQ9H479 309 aa18.6■□□□□ 0.57
TMEM53-207ENST00000468117 A0A0G2JMM0 328 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 A0A1W2PPB8 328 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 A0A1W2PRS3 328 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 KIR3DP1A8MWS1 328 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 H3BML4 177 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 SNPHO15079 494 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 MT-ATP6P00846 226 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 HIST1H1CP16403 213 aaKnown RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 ZNF3P17036 446 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 MTNR1AP48039 350 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 ITGADQ13349 1161 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 ABHD17BQ5VST6 288 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 SLC6A19Q695T7 634 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 MAMDC2Q7Z304 686 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 LRRC75AQ8NAA5 344 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 OR52E2Q8NGJ4 325 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 OR4K13Q8NH42 304 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 PTP4A1Q93096 173 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 RNFT2Q96EX2 444 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 TMEM80Q96HE8 168 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 GPX7Q96SL4 187 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 H2AFY2Q9P0M6 372 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 FAM47E-STBD1D6RA91 191 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 PRR23D1E9PI22 279 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 TSPAN19P0C672 248 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 PRR23D2P0DMB1 279 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 TBCEQ15813 527 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-207ENST00000468117 GPR107Q5VW38 600 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 TIGD3Q6B0B8 471 aa18.59■□□□□ 0.57
TMEM53-207ENST00000468117 C5orf46Q6UWT4 87 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms