RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 KAT8Q9H7Z6 458 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC6A20Q9NP91 592 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 MIOSQ9NXC5 875 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 VNN3Q9NY84 501 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 NUFIP1Q9UHK0 495 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 FZD4Q9ULV1 537 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ANKRD31Q8N7Z5 1873 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 UPK1AO00322 258 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RFXANKO14593 260 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC25A12O75746 678 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PAPSS2O95340 614 aaPredicted RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TGFB1P01137 390 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 IFNA2P01563 188 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TCRBP04435 133 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 NDUFS1P28331 727 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RABGGTBP53611 331 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ISL1P61371 349 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 COL28A1Q2UY09 1125 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RNF130Q86XS8 419 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 MFSD6LQ8IWD5 586 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 STHQ8IWL8 128 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC35F3Q8IY50 421 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 YIPF7Q8N8F6 280 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 OR4A16Q8NH70 328 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 MBD3L2Q8NHZ7 208 aaPredicted RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 WFIKKN2Q8TEU8 576 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 CA5BP1Q8WTZ4 195 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 WBP1Q96G27 269 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 FOPNLQ96NB1 174 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 HOPXQ9BPY8 73 aaPredicted RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 DDA1Q9BW61 102 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ELOVL3Q9HB03 270 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 THSD1Q9NS62 852 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RNF181Q9P0P0 153 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PIPOXQ9P0Z9 390 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 KIAA1456Q9P272 454 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ATG4BQ9Y4P1 393 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PEX16Q9Y5Y5 336 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 U3KQ87 197 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ELOA3CA0A087WX78 387 aaPredicted RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 A0A1W2PPE3 182 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 TCRBV5S1A1TA0A578 114 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 ELOA3DA6NLF2 546 aaPredicted RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 OR1F1O43749 312 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC28A2O43868 658 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 SRP72O76094 671 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 SUPT7LO94864 414 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 PROS1P07225 676 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 DCNP07585 359 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 SRFP11831 508 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 CD72P21854 359 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 BMP5P22003 454 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 FPR2P25090 351 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 LAP3P28838 519 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 MEOX2P50222 304 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 PGDP52209 483 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 KPNA2P52292 529 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 LSM3P62310 102 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 DHODHQ02127 395 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 TNXAQ16473 311 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 MRPL23Q16540 153 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 MEP1AQ16819 746 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 CLLU1Q5K131 121 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 SPOUT1Q5T280 376 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 ADGRE4PQ86SQ3 457 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 CACUL1Q86Y37 369 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 CMTM8Q8IZV2 173 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 B3GNT7Q8NFL0 401 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 PROKR1Q8TCW9 393 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 ATOH1Q92858 354 aaPredicted RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 RTP4Q96DX8 246 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 MBOAT4Q96T53 435 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 DUSP15Q9H1R2 295 aaPredicted RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 DUSP21Q9H596 190 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 ABCB9Q9NP78 766 aa7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 NXT1Q9UKK6 140 aaKnown RBP7.02□□□□□ -1.28
SPTBN1-204ENST00000467371 ATP6AP2A0A1C7CYW4 349 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 A0A1W2PPC1 479 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 CIB4A0PJX0 185 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 VSTM2BA6NLU5 285 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 EFCAB9A8MZ26 197 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 TFECO14948 347 aaPredicted RBP7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 HCRTO43612 131 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 FADS1O60427 444 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 NKX2-2O95096 273 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 TFP02787 698 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 ANXA7P20073 488 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 GLUD2P49448 558 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 POLR2LP62875 67 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 MVKQ03426 396 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 CD47Q08722 323 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 RNPS1Q15287 305 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 LRIF1Q5T3J3 769 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 SLC22A10Q63ZE4 541 aa7.02□□□□□ -1.29
SPTBN1-204ENST00000467371 OR52W1Q6IF63 320 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms