RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 B3GALT5Q9Y2C3 310 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 LYVE1Q9Y5Y7 322 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GMEB1Q9Y692 573 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 POMT1Q9Y6A1 747 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TRAV6A0A075B6T7 132 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 A0A0G2JN53 185 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8QA0A0J9YX86 632 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8OA6NCC3 632 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 EFCAB8A8MWE9 144 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8KD6RF30 607 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8NF8WBI6 632 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 TRIM77I1YAP6 450 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8RI6L899 631 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ACOX3O15254 700 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 SPRY2O43597 315 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 FGF17O60258 216 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 SS18L1O75177 396 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ERLIN1O75477 346 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 AIFM1O95831 613 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 TGFAP01135 160 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 INHBAP08476 426 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 UBTFL6P0CB48 400 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 APEHP13798 732 aaKnown RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 HIST1H1TP22492 207 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CPN2P22792 545 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ATP5A1P25705 553 aaKnown RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 GCH1P30793 250 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 SRP14P37108 136 aaKnown RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 WNT5AP41221 380 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 HAAOP46952 286 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 PITPNBP48739 271 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 EFNA4P52798 201 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 HNRNPH2P55795 449 aaKnown RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CTBP2P56545 445 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CARD18P57730 90 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 PSPHP78330 225 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CRADDP78560 199 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CDKL1Q00532 357 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 SF3A3Q12874 501 aaKnown RBP eCLIP4.78□□□□□ -1.642e-9■■□□□ 14
PTCD3-207ENST00000467273 GANABQ14697 944 aaKnown RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CYP1B1Q16678 543 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 EXOC3L2Q2M3D2 409 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 MIDNQ504T8 468 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 C11orf71Q6IPW1 123 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CCDC144NLQ6NUI1 221 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 C6orf89Q6UWU4 347 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 Q6YL49 198 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 IL17RELQ6ZVW7 336 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 NKAIN4Q8IVV8 208 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF525Q8N782 197 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ACOT4Q8N9L9 421 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 WDSUB1Q8N9V3 476 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 OR7G1Q8NGA0 311 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 MIPOL1Q8TD10 442 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF418Q8TF45 676 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 FIG4Q92562 907 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ADIPOR1Q96A54 375 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 PRR25Q96S07 402 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 SIKE1Q9BRV8 207 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CACNG6Q9BXT2 260 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 MUC13Q9H3R2 512 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 MYOZ1Q9NP98 299 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-207ENST00000467273 TRIM36Q9NQ86 728 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 G6PC2Q9NQR9 355 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 EHD3Q9NZN3 535 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 KLRF1Q9NZS2 232 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 NDUFAF4Q9P032 175 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 PHF11Q9UIL8 331 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 MGAT4BQ9UQ53 548 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 CFL2Q9Y281 166 aa4.78□□□□□ -1.64
PTCD3-207ENST00000467273 A0A1W2PQ09 198 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 OR6C70A6NIJ9 312 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 MIF4GDA9UHW6 222 aaKnown RBP4.77□□□□□ -1.65
PTCD3-207ENST00000467273 AP4M1O00189 453 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ANGPT2O15123 496 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TO15178 435 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TP73O15350 636 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 LIASO43766 372 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 VENTXO95231 258 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 GPR75O95800 540 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CLPSP04118 112 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SLC35E2BP0CK96 405 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SLC35E2P0CK97 266 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 CCDC166P0CW27 439 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 NR2F6P10588 404 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF23P17027 643 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PTAFRP25105 342 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 DPP4P27487 766 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 SERPINB1P30740 379 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 TTKP33981 857 aa4.77□□□□□ -1.65
PTCD3-207ENST00000467273 PTGDSP41222 190 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms