RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 PGM3O95394 542 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 CPSF4O95639 269 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 CD247P20963 164 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 IGHV1-2P23083 117 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 APOBEC1P41238 236 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 SLC1A6P48664 564 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 KHKP50053 298 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 RPL14P50914 215 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 CLNS1AP54105 237 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 CSNK2A1P68400 391 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 TNK1Q13470 666 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 PDK3Q15120 406 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 PPA1Q15181 289 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ETFDHQ16134 617 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 DPY19L1Q2PZI1 675 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 PGGHGQ32M88 737 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 FAM174BQ3ZCQ3 159 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ZNF672Q499Z4 452 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 HSP90B2PQ58FF3 399 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 TNFAIP8L3Q5GJ75 292 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 TIMM23BQ5SRD1 257 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ATAD3BQ5T9A4 648 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ANXA8L1Q5VT79 327 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 SSX8Q7RTT4 187 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 GRINAQ7Z429 371 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 THAP5Q7Z6K1 395 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 MTDHQ86UE4 582 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 LRRC34Q8IZ02 419 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 KIRREL3Q8IZU9 778 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ZNF433Q8N7K0 673 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 VPS37AQ8NEZ2 397 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 SMAP2Q8WU79 429 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 XAGE5Q8WWM1 108 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ROPN1LQ96C74 230 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 ARL5BQ96KC2 179 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 TEX37Q96LM6 180 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 SLC35A5Q9BS91 424 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 NUF2Q9BZD4 464 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 PIF1Q9H611 641 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 MEAF6Q9HAF1 191 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 MED4Q9NPJ6 270 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 EXOSC3Q9NQT5 275 aaKnown RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 CTPS2Q9NRF8 586 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 POLE3Q9NRF9 147 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 NPAP1Q9NZP6 1156 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 MARCOQ9UEW3 520 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 CHRNA9Q9UGM1 479 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 HDGFL3Q9Y3E1 203 aa6.21□□□□□ -1.42
SND1-205ENST00000467238 SPIN1Q9Y657 262 aaPredicted RBP6.21□□□□□ -1.42
SND1-205ENST00000467238 GOLGA8QA0A0J9YX86 632 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 A0A1W2PP18 115 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 GOLGA8OA6NCC3 632 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 OR5H1A6NKK0 313 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 GOLGA8NF8WBI6 632 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 HMGN4O00479 90 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 DNPH1O43598 174 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 RAMP1O60894 148 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 PMS2P2O95744 297 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 C1QCP02747 245 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 TFPIP10646 304 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 LBPP18428 481 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 GGT1P19440 569 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 BGNP21810 368 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 FKBP2P26885 142 aaKnown RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 RYKP34925 604 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 IDUAP35475 653 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 CHI3L1P36222 383 aaPredicted RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 CDKN1AP38936 164 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 SLC16A1P53985 500 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 KCNJ10P78508 379 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 HPCAP84074 193 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 H3F3AP84243 136 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 PPP2R2BQ00005 443 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 CHRNEQ04844 493 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 BST1Q10588 318 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 VEZF1Q14119 521 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 STK11Q15831 433 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 CLEC12BQ2HXU8 276 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 GPAT3Q53EU6 434 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 FBXW9Q5XUX1 488 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 DNM1P46Q6ZS02 220 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 HMGN2P46Q86SG4 172 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 DTX2Q86UW9 622 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 P2RY8Q86VZ1 359 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 RNF130Q86XS8 419 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ADGRG3Q86Y34 549 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ZNF100Q8IYN0 542 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ZNF563Q8TA94 476 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ZHX1-C8orf76Q96EF9 292 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 DNAJA3Q96EY1 480 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 TRMT61AQ96FX7 289 aaKnown RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 CCDC115Q96NT0 180 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 TRAF4Q9BUZ4 470 aaPredicted RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 OR11A1Q9GZK7 315 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 SLC38A1Q9H2H9 487 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 SLCO5A1Q9H2Y9 848 aa6.2□□□□□ -1.42
SND1-205ENST00000467238 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.2□□□□□ -1.42
SND1-205ENST00000467238 EMC3Q9P0I2 261 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms