RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
APTX-213ENST00000465003 DOPEY1Q5JWR5 2465 aa10.6□□□□□ -0.71
APTX-213ENST00000465003 FREM1Q5H8C1 2179 aa10.6□□□□□ -0.71
APTX-213ENST00000465003 LIPT2A6NK58 231 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 C19orf84I3L1E1 186 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 FMO6PO60774 539 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 TNFSF13O75888 250 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 AHSA1O95433 338 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 SEMG1P04279 462 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 TIMP3P35625 211 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 FLOT2Q14254 428 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 PDSS1Q5T2R2 415 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 TMEM211Q6ICI0 200 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 LCN8Q6JVE9 175 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 GPAT4Q86UL3 456 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 EID3Q8N140 333 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 LRRC17Q8N6Y2 441 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 UTP4Q969X6 686 aaKnown RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 C7orf34Q96L11 122 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 LRMDAQ9H2I8 198 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 MEPEQ9NQ76 525 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 POMPQ9Y244 141 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 HDGFL3Q9Y3E1 203 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 A0A1W2PNV4 684 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 WIPF3A6NGB9 483 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 SERPINI2O75830 405 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 PRSS23O95084 383 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 RCBTB2O95199 551 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 PMS2P2O95744 297 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 CH25HO95992 272 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 PNMTP11086 282 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 CSNK2A1P68400 391 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 IQCCQ4KMZ1 466 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 OTUD3Q5T2D3 398 aaPredicted RBP10.59□□□□□ -0.71
APTX-213ENST00000465003 RIPPLY2Q5TAB7 128 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 ARHGAP24Q8N264 748 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 LRGUKQ96M69 825 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 TM9SF2Q99805 663 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 PSD2Q9BQI7 771 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 FNDC11Q9BVV2 318 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 TIGARQ9NQ88 270 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 AURKCQ9UQB9 309 aa10.59□□□□□ -0.71
APTX-213ENST00000465003 FTCDNL1E5RQL4 147 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 M0R082 166 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 IGHV3-9P01782 118 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 GPIP06744 558 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 HOXD4P09016 255 aaPredicted RBP10.58□□□□□ -0.72
APTX-213ENST00000465003 GRPRP30550 384 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 CHRNB4P30926 498 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 NTF4P34130 210 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 SMSP52788 366 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 RASGEF1BQ0VAM2 473 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 FGD3Q5JSP0 725 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 LINC00114Q6XXX2 140 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 ASRGL1Q7L266 308 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
APTX-213ENST00000465003 BTLAQ7Z6A9 289 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 ZNF417Q8TAU3 575 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 ZNF587Q96SQ5 575 aaPredicted RBP10.58□□□□□ -0.72
APTX-213ENST00000465003 TAPBPLQ9BX59 468 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 NMNAT1Q9HAN9 279 aaPredicted RBP10.58□□□□□ -0.72
APTX-213ENST00000465003 ZNF175Q9Y473 711 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 ENPP4Q9Y6X5 453 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 USP9YO00507 2555 aaPredicted RBP10.58□□□□□ -0.72
APTX-213ENST00000465003 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
APTX-213ENST00000465003 ENO4A6NNW6 628 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 OR5F1O95221 314 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 FABP3P05413 133 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 CTSSP25774 331 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 AGTR1P30556 359 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 IL1RL1Q01638 556 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 SPIBQ01892 262 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 EXOC3L2Q2M3D2 409 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 FAM69AQ5T7M9 428 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 TTC33Q6PID6 262 aaPredicted RBP10.57□□□□□ -0.72
APTX-213ENST00000465003 ZDHHC21Q8IVQ6 265 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 ZNF808Q8N4W9 903 aaPredicted RBP10.57□□□□□ -0.72
APTX-213ENST00000465003 CANT1Q8WVQ1 401 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 TMEM239Q8WW34 195 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 STARD4Q96DR4 205 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 PAQR5Q9NXK6 330 aaPredicted RBP10.57□□□□□ -0.72
APTX-213ENST00000465003 TRAV36DV7A0A075B6V5 113 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 HSPB2A8KAH6 182 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 CYTIPO60759 359 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 ATP5HO75947 161 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 CLDN14O95500 239 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 BGLAPP02818 100 aa10.57□□□□□ -0.72
APTX-213ENST00000465003 UMPSP11172 480 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms