RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 MICBQ29980 383 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF630Q2M218 657 aaPredicted RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 KLHL38Q2WGJ6 581 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 PARP15Q460N3 678 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 BCL7AQ4VC05 210 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 CTRB2Q6GPI1 263 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ZSCAN25Q6NSZ9 544 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 CASC1Q6TDU7 716 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 TMIGD1Q6UXZ0 262 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 COX15Q7KZN9 410 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 DHDDSQ86SQ9 333 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 CCDC50Q8IVM0 306 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 SLC35F2Q8IXU6 374 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 PIANPQ8IYJ0 282 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 FTMTQ8N4E7 242 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 EIF1ADQ8N9N8 165 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 DCAF4L2Q8NA75 395 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 SUMF2Q8NBJ7 301 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 OR52H1Q8NGJ2 320 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 MAGEE2Q8TD90 523 aaPredicted RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 NT5C3BQ969T7 300 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 MARC2Q969Z3 335 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 RPUSD4Q96CM3 377 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 TIMD4Q96H15 378 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF414Q96IQ9 312 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ITCHQ96J02 903 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 RBM14Q96PK6 669 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 RNF2Q99496 336 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 NPAS2Q99743 824 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 NRTNQ99748 197 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 P2RY13Q9BPV8 354 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 MRPL45Q9BRJ2 306 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 VCX2Q9H322 139 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 NXF3Q9H4D5 531 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 REEP4Q9H6H4 257 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 LRRC40Q9H9A6 602 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 FN3KRPQ9HA64 309 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 MCCC2Q9HCC0 563 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 CLCF1Q9UBD9 225 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF639Q9UID6 485 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ADAM28Q9UKQ2 775 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 CDH9Q9ULB4 789 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 STAP1Q9ULZ2 295 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 ASF1AQ9Y294 204 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 TP53TG5Q9Y2B4 290 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 RPL36Q9Y3U8 105 aaKnown RBP1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 V9GY05 133 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
NUCKS1-202ENST00000464938 PRRC2AP48634 2157 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PLEKHH1Q9ULM0 1364 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CDC42BPBQ9Y5S2 1711 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 FANCIQ9NVI1 1328 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A1W2PPV9 198 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TCRBV9S1A1TA0A576 114 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 A6NIZ1 184 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 MBTPS2O43462 519 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 UGT1A9O60656 530 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 DIRAS1O95057 198 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CLDN9O95484 217 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TSPAN12O95859 305 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 HSMCR30P0CW71 290 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RBMY1CP0DJD4 496 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 DBTP11182 482 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RCC1P18754 421 aaPredicted RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TBPP20226 339 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PTMSP20962 102 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 COX7A1P24310 79 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CXCR2P25025 360 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 IL12AP29459 219 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PRDX3P30048 256 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 NUDT1P36639 197 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 VHLP40337 213 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 GLP1RP43220 463 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 MAGEA8P43361 318 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CAV2P51636 162 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RAP1BP61224 184 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CDK16Q00536 496 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CAPRIN1Q14444 709 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 CEP55Q53EZ4 464 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 TMEM255AQ5JRV8 349 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PDZK1Q5T2W1 519 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 OR52E8Q6IFG1 317 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 C1orf94Q6P1W5 598 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF530Q6P9A1 599 aaPredicted RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 KDELC1Q6UW63 502 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 IGFL2Q6UWQ7 119 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RGS9BPQ6ZS82 235 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 EFL1Q7Z2Z2 1120 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 RALGPS2Q86X27 583 aaPredicted RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 PNKDQ8N490 385 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF740Q8NDX6 193 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 BHLHE23Q8NDY6 225 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM83FQ8NEG4 500 aaPredicted RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 NPBQ8NG41 125 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 OR6C4Q8NGE1 309 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 OR8J1Q8NGP2 316 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM110BQ8TC76 370 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 FAM151AQ8WW52 585 aa1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 SRSF12Q8WXF0 261 aaKnown RBP1.24□□□□□ -2.21
NUCKS1-202ENST00000464938 ACOT11Q8WXI4 607 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms