RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 MIER2Q8N344 545 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 OR9K2Q8NGE7 335 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 OR9I1Q8NGQ6 314 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 TMEM19Q96HH6 336 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 SLC17A5Q9NRA2 495 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 SLC6A13Q9NSD5 602 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 ZIM2Q9NZV7 527 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 MALT1Q9UDY8 824 aa12.14□□□□□ -0.47
RPP40-203ENST00000464646 ABCA2Q9BZC7 2435 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 A8MVM7 634 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 FRS3O43559 492 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 CRLF1O75462 422 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 AHSA1O95433 338 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 RPS4Y1P22090 263 aaKnown RBP12.13□□□□□ -0.47
RPP40-203ENST00000464646 MPGP29372 298 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 MAP2K6P52564 334 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
RPP40-203ENST00000464646 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
RPP40-203ENST00000464646 SLC17A1Q14916 467 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 HIKESHIQ53FT3 197 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 TNFAIP8L3Q5GJ75 292 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 POMGNT2Q8NAT1 580 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 SLC38A5Q8WUX1 472 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 MUS81Q96NY9 551 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
RPP40-203ENST00000464646 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 RAD21L1Q9H4I0 556 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 TMEM45AQ9NWC5 275 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 DCTN4Q9UJW0 460 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 MOKQ9UQ07 419 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 IFT52Q9Y366 437 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 PMF1-BGLAPU3KQ54 211 aa12.13□□□□□ -0.47
RPP40-203ENST00000464646 IGHV4-30-2A0A087WSY4 118 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 A0A0G2JPF8 293 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 CDHR4A6H8M9 788 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 AQP7P3A6NL99 342 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ELOA3DA6NLF2 546 aaPredicted RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 HNRNPCL2B2RXH8 293 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 HNRNPCL3B7ZW38 293 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ZNF587BE7ETH6 402 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 FAAHO00519 579 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 HNRNPCL1O60812 293 aaKnown RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 SNNO75324 88 aaPredicted RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 HNRNPCL4P0DMR1 293 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 RPS5P46782 204 aaKnown RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 H3F3AP84243 136 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 HOXC5Q00444 222 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ELOA3BQ3SY89 546 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 HMBOX1Q6NT76 420 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 SLC2A7Q6PXP3 512 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 VHLLQ6RSH7 139 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 SERPINA11Q86U17 422 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 C17orf78Q8N4C9 275 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ELOA3Q8NG57 546 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ALKBH3Q96Q83 286 aaPredicted RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 MDFIQ99750 246 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 SF3B5Q9BWJ5 86 aaKnown RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 SPATA9Q9BWV2 254 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
RPP40-203ENST00000464646 NF1P21359 2839 aa12.12□□□□□ -0.47
RPP40-203ENST00000464646 RTTNQ86VV8 2226 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 ABCA1O95477 2261 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 A0A096LPE4 126 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 A0A1W2PPZ6 126 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 CLIC1O00299 241 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 CD5LO43866 347 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 GPRIN2O60269 458 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 LGI1O95970 557 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 IFNA2P01563 188 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 TFPTP0C1Z6 253 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 PRG2P13727 222 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 CBLP22681 906 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 ACAA2P42765 397 aaKnown RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 CAPZA2P47755 286 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 SELENOPP49908 381 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 CLDN17P56750 224 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 NCALDP61601 193 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 C1DQ13901 141 aaKnown RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 KDM8Q8N371 416 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 FAM168AQ92567 244 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 MAL2Q969L2 176 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms